RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MOSPD1Q9UJG1 213 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 ADAM28Q9UKQ2 775 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 FADS3Q9Y5Q0 445 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 ELP1O95163 1332 aa-0.35□□□□□ -2.46
COPB1-212ENST00000534771 CEP170Q5SW79 1584 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 LAMA4Q16363 1823 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 A0A0G2JMP0 313 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 A0A0X1KG70 313 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 C17orf98A8MV24 154 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 A8MWP4 228 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 H3BMM0 161 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 KLRC4-KLRK1H3BQV0 150 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 K7ERS5 55 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 NMT2O60551 498 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 CXorf1O96002 111 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 SERPIND1P05546 499 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 KRTAP2-3P0C7H8 128 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ZNF705DP0CH99 300 aaPredicted RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ZNF705BP0CI00 300 aaPredicted RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 MLNP12872 115 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 PSMB9P28065 219 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 FOXN2P32314 431 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 NDUFA8P51970 172 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 KCNJ2P63252 427 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 SEMG2Q02383 582 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 TRDNQ13061 729 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ZNF791Q3KP31 576 aaPredicted RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 LRRC66Q68CR7 880 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 UQCC3Q6UW78 93 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ISLR2Q6UXK2 745 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 C12orf54Q6X4T0 127 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 RBM45Q8IUH3 476 aaKnown RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ITPRIPQ8IWB1 547 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 HDDC3Q8N4P3 179 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 MS4A15Q8N5U1 240 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 BPIFCQ8NFQ6 507 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 BAALCQ8WXS3 180 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 UBE2WQ96B02 151 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 NRBF2Q96F24 287 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 EMC6Q9BV81 110 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 KRTAP2-4Q9BYR9 128 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 KRTAP2-1Q9BYU5 128 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 API5Q9BZZ5 524 aaKnown RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 GABARAPL1Q9H0R8 117 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 C10orf95Q9H7T3 257 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 RHOFQ9HBH0 211 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 RDH14Q9HBH5 336 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ABCB9Q9NP78 766 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 PRSS16Q9NQE7 514 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 FARSBQ9NSD9 589 aaKnown RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 TMEM38BQ9NVV0 291 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 DCAF16Q9NXF7 216 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 LGALS13Q9UHV8 139 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 PIN4Q9Y237 131 aaKnown RBP-0.35□□□□□ -2.47
COPB1-212ENST00000534771 PEX16Q9Y5Y5 336 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 U3KQV3 271 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 NCKAP5O14513 1909 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 ABCC9O60706 1549 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 KDM5BQ9UGL1 1544 aa-0.35□□□□□ -2.47
COPB1-212ENST00000534771 OTOFQ9HC10 1997 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 LRP1Q07954 4544 aaKnown RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 DISP1Q96F81 1524 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TRAV26-1A0A087WT03 109 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 A0A0A6YYD5 115 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 A0A1W2PPV9 198 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 FAM170AA1A519 330 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 NCBP2LA6PVI3 153 aaKnown RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 LYRM9A8MSI8 78 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 CTNSO60931 367 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TMEM50AO95807 157 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 AK1P00568 194 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TRBV12-3P01733 135 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 CTLA4P16410 223 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TEAD1P28347 426 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 SLC6A1P30531 599 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 RAB9AP51151 201 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 CCNHP51946 323 aaPredicted RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 ZNF121P58317 390 aaPredicted RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 RPS15P62841 145 aaKnown RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 HOXC5Q00444 222 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 IRF8Q02556 426 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 FGL1Q08830 312 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TGFBIQ15582 683 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 INAQ16352 499 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 PDK4Q16654 411 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 TPRXLQ17RH7 258 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 C6orf99Q4VX62 202 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 KDELC1Q6UW63 502 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 MBOAT1Q6ZNC8 495 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 MBOAT2Q6ZWT7 520 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 FAM58AQ8N1B3 248 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 WDR31Q8NA23 367 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 OR8S1Q8NH09 359 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 OR5B3Q8NH48 314 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 MFSD8Q8NHS3 518 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 PLPPR1Q8TBJ4 325 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 FAM57AQ8TBR7 257 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 ISG20Q96AZ6 181 aaKnown RBP-0.36□□□□□ -2.47
COPB1-212ENST00000534771 CCDC126Q96EE4 140 aa-0.36□□□□□ -2.47
COPB1-212ENST00000534771 MRPL48Q96GC5 212 aaKnown RBP-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms