RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 CEP19Q96LK0 163 aa10.54□□□□□ -0.72
TRAPPC9-206ENST00000519482 C6orf62Q9GZU0 229 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-206ENST00000519482 EMC7Q9NPA0 242 aa10.54□□□□□ -0.72
TRAPPC9-206ENST00000519482 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
TRAPPC9-206ENST00000519482 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
TRAPPC9-206ENST00000519482 ARHGAP32A7KAX9 2087 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 J3QLW9 94 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 HAX1O00165 279 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 DOK2O60496 412 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 GATBO75879 557 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 SULT1C4O75897 302 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 RGS9O75916 674 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 VENTXO95231 258 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 CLUP10909 449 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 ZNF19P17023 458 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 GATA3P23771 443 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 TGFBR1P36897 503 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 HTR5AP47898 357 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 TGM4P49221 684 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 MTNR1BP49286 362 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 LSM6P62312 80 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 RPS25P62851 125 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 FABP5Q01469 135 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 PSG7Q13046 419 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 DOC2BQ14184 412 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 DMKNQ6E0U4 476 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 C22orf42Q6IC83 251 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 MZT2AQ6P582 158 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 C1orf229Q6ZS94 237 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 SEMA6DQ8NFY4 1073 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 CHPT1Q8WUD6 406 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 ZMYND19Q96E35 227 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 WDFY2Q96P53 400 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 GAL3ST1Q99999 423 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 RNF167Q9H6Y7 350 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 ISG20L2Q9H9L3 353 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 MSL2Q9HCI7 577 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 VSX1Q9NZR4 365 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 ATPIF1Q9UII2 106 aa10.53□□□□□ -0.72
TRAPPC9-206ENST00000519482 J3QRK9 145 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 J3QW42 95 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 LALBAP00709 142 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 AVPP01185 164 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 CTLA4P16410 223 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 KITLGP21583 273 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 TNFSF4P23510 183 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.734e-7■■■■■ 37.3
TRAPPC9-206ENST00000519482 CRABP1P29762 137 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 SDC2P34741 201 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 TNFAIP6P98066 277 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 DCAF12L2Q5VW00 463 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 C1QL2Q7Z5L3 287 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 CCDC190Q86UF4 302 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 ZBTB46Q86UZ6 589 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 ST7LQ8TDW4 575 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 ASB17Q8WXJ9 295 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 KCTD12Q96CX2 325 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 RASD2Q96D21 266 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 C4orf36Q96KX1 117 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 DCLRE1CQ96SD1 692 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 SLC30A2Q9BRI3 323 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 SYT4Q9H2B2 425 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 MARCH7Q9H992 704 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 SRA1Q9HD15 236 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 PLEK2Q9NYT0 353 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 PURGQ9UJV8 347 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 PCDHB10Q9UN67 800 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 NPTNQ9Y639 398 aa10.52□□□□□ -0.73
TRAPPC9-206ENST00000519482 PPIAL4EA0A075B759 164 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 LOC105371242A0A075B767 164 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 PPIAL4CA0A0B4J2A2 164 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 OR6C6A6NF89 314 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 PPIAL4DF5H284 164 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 GABRPO00591 440 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 SLC16A7O60669 478 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 GYPBP06028 91 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 PPIAL4FP0DN26 164 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 EPHA1P21709 976 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 PYCR1P32322 319 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 TNFSF8P32971 234 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 OR12D2P58182 307 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 HILS1P60008 231 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 EGR3Q06889 387 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 KCNMB1Q16558 191 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 DNM1P34Q6PK57 102 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 METAP1DQ6UB28 335 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 OR6K6Q8NGW6 343 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 NANPQ8TBE9 248 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 HAVCR1Q96D42 359 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 JMJD8Q96S16 334 aa10.51□□□□□ -0.73
TRAPPC9-206ENST00000519482 TBX5Q99593 518 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms