RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MAPK3P27361 379 aaPredicted RBP8.43□□□□□ -1.06
CCL28-203ENST00000513525 BCAP31P51572 246 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 CLRN1P58418 232 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 RPS11P62280 158 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCL28-203ENST00000513525 ROM1Q03395 351 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 GLO1Q04760 184 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 ALKBH1Q13686 389 aaKnown RBP8.43□□□□□ -1.06
CCL28-203ENST00000513525 INSL4Q14641 139 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 ZNF79Q15937 498 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 TEX30Q5JUR7 227 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 C10orf128Q5T292 105 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 LIPNQ5VXI9 398 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 SLC18B1Q6NT16 456 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 FAM131AQ6UXB0 335 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 YIPF7Q8N8F6 280 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 POC5Q8NA72 575 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 OR6N2Q8NGY6 317 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 UBASH3BQ8TF42 649 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 MCHR2Q969V1 340 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 SHARPINQ9H0F6 387 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 ZCCHC4Q9H5U6 513 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 COMMD3Q9UBI1 195 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 KLHDC2Q9Y2U9 406 aa8.43□□□□□ -1.06
CCL28-203ENST00000513525 WNK2Q9Y3S1 2297 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 A0A0G2JK05 382 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 LOC100289279A0A1B0GTE1 492 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 TMEM212A6NML5 194 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 NOTOA8MTQ0 251 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 PRR32B1ATL7 298 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 PDCD5O14737 125 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 MAGEB4O15481 346 aaPredicted RBP8.42□□□□□ -1.06
CCL28-203ENST00000513525 KHDRBS3O75525 346 aaKnown RBP8.42□□□□□ -1.06
CCL28-203ENST00000513525 NCR1O76036 304 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 PATE4P0C8F1 98 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 CTLA4P16410 223 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 RAB3BP20337 219 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 APEX1P27695 318 aaKnown RBP8.42□□□□□ -1.06
CCL28-203ENST00000513525 PSMB10P40306 273 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 ZNF84P51523 738 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 CCR9P51686 369 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 CAV3P56539 151 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 SLC36A2Q495M3 483 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 HSD17B12Q53GQ0 312 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 NKAPLQ5M9Q1 402 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 TMEM53Q6P2H8 277 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 SFXN4Q6P4A7 337 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 KCTD18Q6PI47 426 aaPredicted RBP8.42□□□□□ -1.06
CCL28-203ENST00000513525 DPY19L4Q7Z388 723 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 ZNF554Q86TJ5 538 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 LRRC28Q86X40 367 aaPredicted RBP8.42□□□□□ -1.06
CCL28-203ENST00000513525 OR8H2Q8N162 312 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 C1orf159Q96HA4 380 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 OR8B4Q96RC9 309 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 TTTY10Q9BZA0 68 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 PPIL3Q9H2H8 161 aaKnown RBP8.42□□□□□ -1.06
CCL28-203ENST00000513525 ETAA1Q9NY74 926 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 ABRACLQ9P1F3 81 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 IKZF2Q9UKS7 526 aa8.42□□□□□ -1.06
CCL28-203ENST00000513525 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 IGLV3-9A0A075B6K5 115 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 TRBV5-5A0A0J9YX44 114 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 SMIM30A4D0T7 59 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 ZNF593O00488 134 aaPredicted RBP8.41□□□□□ -1.06
CCL28-203ENST00000513525 HPGDSO60760 199 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 HLA-DQA2P01906 255 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 MMP7P09237 267 aaPredicted RBP8.41□□□□□ -1.06
CCL28-203ENST00000513525 NR2C1P13056 603 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 IL7P13232 177 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 PSMD7P51665 324 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 NANOS3P60323 173 aaKnown RBP8.41□□□□□ -1.06
CCL28-203ENST00000513525 MRPS34P82930 218 aaKnown RBP8.41□□□□□ -1.06
CCL28-203ENST00000513525 SCN1BQ07699 218 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 PCK2Q16822 640 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 ELFN2Q5R3F8 820 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 FAM120AOSQ5T036 256 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 IDNKQ5T6J7 187 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 FAM27D1Q5T7N8 215 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 CNIH2Q6PI25 160 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 SLC16A14Q7RTX9 510 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 NR2C2APQ86WQ0 139 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 ZNF679Q8IYX0 411 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 SLC30A7Q8NEW0 376 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 OR1J2Q8NGS2 313 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 OR2G2Q8NGZ5 317 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 OR5AK2Q8NH90 309 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 THEM6Q8WUY1 208 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 NSMAFQ92636 917 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 MAP6Q96JE9 813 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 CMTM3Q96MX0 182 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 PDCD1LG2Q9BQ51 273 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 SYT3Q9BQG1 590 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 SOX7Q9BT81 388 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 MRI1Q9BV20 369 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 COMMD4Q9H0A8 199 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 PPP1R3EQ9H7J1 279 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 RNF121Q9H920 327 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 CHODLQ9H9P2 273 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 CYSLTR2Q9NS75 346 aa8.41□□□□□ -1.06
CCL28-203ENST00000513525 MRPL22Q9NWU5 206 aaKnown RBP8.41□□□□□ -1.06
CCL28-203ENST00000513525 MYEF2Q9P2K5 600 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms