RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 IL5RAQ01344 420 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 PRDX4Q13162 271 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 CDONQ4KMG0 1287 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 STUMQ69YW2 141 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 LDLRAD3Q86YD5 345 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 AQP12AQ8IXF9 295 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 FTMTQ8N4E7 242 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 LY6G5BQ8NDX9 201 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 BBS1Q8NFJ9 593 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 SSMEM1Q8WWF3 244 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 HPSE2Q8WWQ2 592 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 OR5P3Q8WZ94 311 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 MICU1Q9BPX6 476 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 THTPAQ9BU02 230 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 C1RLQ9NZP8 487 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 KPTNQ9Y664 436 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 POMT1Q9Y6A1 747 aa10.72□□□□□ -0.69
HMGCS1-205ENST00000508319 A0A0U1RQK1 487 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 A0A1B0GUS0 222 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 ANXA2P2A6NMY6 339 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 ZNF850A8MQ14 1090 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 E2F6O75461 281 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 NDUFA7O95182 113 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 CST4P01036 141 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 IGHV4-59P01825 116 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 OSMP13725 252 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 SRSF4Q08170 494 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 SNCBQ16143 134 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 FAM76BQ5HYJ3 339 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 SLC36A1Q7Z2H8 476 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 CPOQ8IVL8 374 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 PDZD9Q8IXQ8 264 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 SCCPDHQ8NBX0 429 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 OR8B12Q8NGG6 310 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 OR4F5Q8NH21 305 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 THEM6Q8WUY1 208 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 PKP2Q99959 881 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 RTL8AQ9BWD3 113 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 WDR13Q9H1Z4 485 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 CNTD2Q9H8S5 307 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 ABCB9Q9NP78 766 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 LRP12Q9Y561 859 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
HMGCS1-205ENST00000508319 TGP01266 2768 aa10.71□□□□□ -0.7
HMGCS1-205ENST00000508319 A0A1B0GVI7 797 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 TMEM210A6NLX4 147 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 GNGT2O14610 69 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 KNG1P01042 644 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 HMGN1P05114 100 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 HOXB6P17509 224 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 DCTDP32321 178 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 TGM4P49221 684 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 GMFBP60983 142 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 RPL15P61313 204 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 IKZF1Q13422 519 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 SLC35D3Q5M8T2 416 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 ATPAF1Q5TC12 328 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 METAP1DQ6UB28 335 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 KIR3DL3Q8N743 410 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 OR10Z1Q8NGY1 313 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 C8orf46Q8TAG6 207 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 DYRK2Q92630 601 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 RPL3LQ92901 407 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 DMRTB1Q96MA1 342 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 RAB3IPQ96QF0 476 aaPredicted RBP10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 DCTN5Q9BTE1 182 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 NIPAL2Q9H841 368 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 BEX1Q9HBH7 125 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 SLC25A19Q9HC21 320 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 SNTG1Q9NSN8 517 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 HAO2Q9NYQ3 351 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 ONECUT1Q9UBC0 465 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF391Q9UJN7 358 aa10.7□□□□□ -0.7
HMGCS1-205ENST00000508319 PRR32B1ATL7 298 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 NDUFB3O43676 98 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 GPR137BO60478 399 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 TFF1P04155 84 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 CRYBA1P05813 215 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 ALOX5APP20292 161 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 PRKACGP22612 351 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 IER3P46695 156 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 HCCSP53701 268 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 RPS7P62081 194 aaKnown RBP10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 CBX1P83916 185 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 APOFQ13790 326 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 FLOT2Q14254 428 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 LRRC10Q5BKY1 277 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 TMEM236Q5W0B7 351 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 OLFML2AQ68BL7 652 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF788Q6ZQV5 615 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 KRT74Q7RTS7 529 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 ZDHHC23Q8IYP9 409 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 OR5T2Q8NGG2 359 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 ANGPTL6Q8NI99 470 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 TBC1D15Q8TC07 691 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 GAFA1Q96PS6 74 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms