RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PLCXD3Q63HM9 321 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 UTS2BQ765I0 119 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 UBASH3BQ8TF42 649 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 PHYHIPQ92561 330 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 RDH5Q92781 318 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 PGLYRP3Q96LB9 341 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 OR2V2Q96R30 315 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 SOX7Q9BT81 388 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 CHST5Q9GZS9 411 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 SIRT4Q9Y6E7 314 aaPredicted RBP17.07■□□□□ 0.32
USP53-203ENST00000507597 CELSR2Q9HCU4 2923 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 LRRC30A6NM36 301 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 H3BSH0 61 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 CCRL2O00421 344 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 HLA-DPB1P04440 258 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 IRF2P14316 349 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 MAGEB1P43366 347 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 PPP3R1P63098 170 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 GNG3P63215 75 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 HFEQ30201 348 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 TMEM42Q69YG0 159 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 PRSS57Q6UWY2 283 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 ZCCHC24Q8N2G6 241 aaKnown RBP17.06■□□□□ 0.32
USP53-203ENST00000507597 PARP16Q8N5Y8 322 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 OR10AD1Q8NGE0 317 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 HPS1Q92902 700 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 TMEM106AQ96A25 262 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 PERPQ96FX8 193 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 RNF170Q96K19 258 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 MEGF10Q96KG7 1140 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 OPALINQ96PE5 141 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 ZCCHC4Q9H5U6 513 aa17.06■□□□□ 0.32
USP53-203ENST00000507597 DCHS2Q6V1P9 2916 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 MLNRO43193 412 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 LILRA1O75019 489 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 DAOP14920 347 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 GABRA5P31644 462 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 CRYBB2P43320 205 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 FUT6P51993 359 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 NEDD8Q15843 81 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 SYT6Q5T7P8 510 aaPredicted RBP17.05■□□□□ 0.32
USP53-203ENST00000507597 SHEQ5VZ18 495 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 CLEC2AQ6UVW9 174 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 C1orf87Q8N0U7 546 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 OR11L1Q8NGX0 322 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 OR5P3Q8WZ94 311 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 FOXC2Q99958 501 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 TMED9Q9BVK6 235 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 MRPS26Q9BYN8 205 aaKnown RBP17.05■□□□□ 0.32
USP53-203ENST00000507597 FN3KRPQ9HA64 309 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 PPP1R3CQ9UQK1 317 aa17.05■□□□□ 0.32
USP53-203ENST00000507597 UNC79Q9P2D8 2635 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 IGHV1-69-2A0A0G2JMI3 117 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 TRBV5-5A0A0J9YX44 114 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 ZNF879B4DU55 563 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 F5H5P2 479 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 H0YL77 283 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 ALX3O95076 343 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 RAB3AP20336 220 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 GATA4P43694 442 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 SOX2P48431 317 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 PDLIM4P50479 330 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 ACSM3Q53FZ2 586 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 PEG10Q86TG7 708 aaKnown RBP17.04■□□□□ 0.32
USP53-203ENST00000507597 ZNF573Q86YE8 665 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 PHC2Q8IXK0 858 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 DNAAF1Q8NEP3 725 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 OR51A4Q8NGJ6 313 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 ITLN1Q8WWA0 313 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 SPSB1Q96BD6 273 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 ITPKCQ96DU7 683 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 BORCS8Q96FH0 119 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 SLITRK2Q9H156 845 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 CENPEQ02224 2701 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 CACNA1DQ01668 2161 aa17.04■□□□□ 0.32
USP53-203ENST00000507597 NDUFS8O00217 210 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 SSX4O60224 188 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 ARL6IP5O75915 188 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 ATF1P18846 271 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 GALP22466 123 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 RANBP1P43487 201 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 ATP1B3P54709 279 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 CEP78Q5JTW2 689 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 OR10AC1Q8NH08 325 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 GTF3AQ92664 365 aaKnown RBP17.03■□□□□ 0.32
USP53-203ENST00000507597 ADAT3Q96EY9 351 aaPredicted RBP17.03■□□□□ 0.32
USP53-203ENST00000507597 GPR173Q9NS66 373 aa17.03■□□□□ 0.32
USP53-203ENST00000507597 A6NIN4 97 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 A6NLC8 198 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 TRIM64CA6NLI5 447 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 RGS9O75916 674 aaPredicted RBP17.02■□□□□ 0.32
USP53-203ENST00000507597 IGHV4-39P01824 125 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 HPXP02790 462 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 GRPP07492 148 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 JUNBP17275 347 aaPredicted RBP17.02■□□□□ 0.32
USP53-203ENST00000507597 RBP2P50120 134 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 TMEM33P57088 247 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 TIMM50Q3ZCQ8 353 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 LHFPL2Q6ZUX7 228 aa17.02■□□□□ 0.32
USP53-203ENST00000507597 ZNF671Q8TAW3 534 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms