RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 DHRS7CA6NNS2 312 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 CD55P08174 381 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 ADH4P08319 380 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 DAOP14920 347 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 SRP9P49458 86 aaKnown RBP10.09□□□□□ -0.79
CUX1-210ENST00000497815 RPS11P62280 158 aaKnown RBP eCLIP10.09□□□□□ -0.796e-6■■■■■ 44.3
CUX1-210ENST00000497815 RPS25P62851 125 aaKnown RBP10.09□□□□□ -0.79
CUX1-210ENST00000497815 MAB21L1Q13394 359 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 TPBGQ13641 420 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 INSL4Q14641 139 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 TESK1Q15569 626 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 YIF1BQ5BJH7 314 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 FAM209AQ5JX71 171 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 PRAMEF6Q5VXH4 476 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 TRMT10AQ8TBZ6 339 aaKnown RBP10.09□□□□□ -0.79
CUX1-210ENST00000497815 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 HPSE2Q8WWQ2 592 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 OR5P3Q8WZ94 311 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 FCGR1BQ92637 280 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 ORAI1Q96D31 301 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 ITPKCQ96DU7 683 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 RNF170Q96K19 258 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 MEGF10Q96KG7 1140 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 OR14A2Q96R54 314 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 MICU1Q9BPX6 476 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 RTL8AQ9BWD3 113 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 CXXC4Q9H2H0 198 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 BARX1Q9HBU1 254 aaPredicted RBP10.09□□□□□ -0.79
CUX1-210ENST00000497815 UFSP2Q9NUQ7 469 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 C14orf119Q9NWQ9 140 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 NKIRAS2Q9NYR9 191 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 IL19Q9UHD0 177 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 CACNG2Q9Y698 323 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 CACNA1DQ01668 2161 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 DSCAMO60469 2012 aa10.09□□□□□ -0.79
CUX1-210ENST00000497815 NBPF19A0A087WUL8 3843 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 IGHV1-69-2A0A0G2JMI3 117 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 LOC100289279A0A1B0GTE1 492 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 FAM230AA0A1W2PPH8 454 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 SERPINA3P01011 423 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 CD1AP06126 327 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 CD2P06729 351 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 OCMP0CE72 109 aaPredicted RBP10.08□□□□□ -0.8
CUX1-210ENST00000497815 PAX1P15863 534 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 CPEP16870 476 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 TNFRSF1AP19438 455 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 COL8A2P25067 703 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 THBS2P35442 1172 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 CD200P41217 278 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 GPM6AP51674 278 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 ART1P52961 327 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 MPPED2Q15777 294 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 UBE2V2Q15819 145 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 SSX1Q16384 188 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 Q499Y3 187 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 TMEM42Q69YG0 159 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 WDR86Q86TI4 376 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 MOGAT3Q86VF5 341 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 TGIF2LYQ8IUE0 185 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 PHC2Q8IXK0 858 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 ZNF525Q8N782 197 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 SPERTQ8NA61 448 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 OR13C9Q8NGT0 318 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 PP6455Q8WZ26 134 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 ITFG2Q969R8 447 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 TMEM106AQ96A25 262 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 CHST5Q9GZS9 411 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 FGF23Q9GZV9 251 aaPredicted RBP10.08□□□□□ -0.8
CUX1-210ENST00000497815 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 ABCB9Q9NP78 766 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 TAS2R4Q9NYW5 299 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 PLCE1Q9P212 2302 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 APCP25054 2843 aa10.08□□□□□ -0.8
CUX1-210ENST00000497815 TRBV5-5A0A0J9YX44 114 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 A6NLC8 198 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 ZNF879B4DU55 563 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 ZNF732B4DXR9 585 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 GATBO75879 557 aaKnown RBP10.07□□□□□ -0.8
CUX1-210ENST00000497815 SMIM18P0DKX4 95 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 GP2P55259 537 aaKnown RBP10.07□□□□□ -0.8
CUX1-210ENST00000497815 MZT1Q08AG7 82 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 GPR50Q13585 617 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 CEACAM21Q3KPI0 293 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 ACSM3Q53FZ2 586 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 Q5PR19 223 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 CEACAM19Q7Z692 300 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 SERPINA12Q8IW75 414 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 LRRC75A-AS1Q8N1F1 130 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 MS4A15Q8N5U1 240 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 ZNF420Q8TAQ5 688 aaPredicted RBP10.07□□□□□ -0.8
CUX1-210ENST00000497815 CCL17Q92583 94 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 RDH5Q92781 318 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 YIPF5Q969M3 257 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 MUL1Q969V5 352 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 C10orf35Q96D05 121 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 ZCCHC4Q9H5U6 513 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 GCM1Q9NP62 436 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 C1orf123Q9NWV4 160 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 SLC7A11Q9UPY5 501 aa10.07□□□□□ -0.8
CUX1-210ENST00000497815 PPP1R3CQ9UQK1 317 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms