RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 DNAJC27Q9NZQ0 273 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 FBLN5Q9UBX5 448 aa18.5■□□□□ 0.55
USP4-208ENST00000464168 APOC1P02654 83 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 IL5RAQ01344 420 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 DGUOKQ16854 277 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 GFOD2Q3B7J2 385 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 ZNF788Q6ZQV5 615 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 PGAM4Q8N0Y7 254 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 OR10Z1Q8NGY1 313 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 RPL3LQ92901 407 aaKnown RBP18.49■□□□□ 0.55
USP4-208ENST00000464168 GAFA1Q96PS6 74 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 AMELYQ99218 206 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 OR10A2Q9H208 303 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 BRD7Q9NPI1 651 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 ZNF391Q9UJN7 358 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 BAIAP2Q9UQB8 552 aa18.49■□□□□ 0.55
USP4-208ENST00000464168 ANKRD61A6NGH8 418 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 CCNB2O95067 398 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 OPRL1P41146 370 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 MXRA7P84157 204 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 ACSM1Q08AH1 577 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 FAM76BQ5HYJ3 339 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 AQP11Q8NBQ7 271 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 OR2T33Q8NG76 320 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 ANGPTL6Q8NI99 470 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 PPP1R35Q8TAP8 253 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 OR5P3Q8WZ94 311 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 MED30Q96HR3 178 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 RTL8AQ9BWD3 113 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 FGF23Q9GZV9 251 aaPredicted RBP18.48■□□□□ 0.55
USP4-208ENST00000464168 METTL8Q9H825 291 aaKnown RBP18.48■□□□□ 0.55
USP4-208ENST00000464168 ARMC1Q9NVT9 282 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 SLC25A10Q9UBX3 287 aaPredicted RBP18.48■□□□□ 0.55
USP4-208ENST00000464168 SIGLEC9Q9Y336 463 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 MPC1Q9Y5U8 109 aa18.48■□□□□ 0.55
USP4-208ENST00000464168 ANXA2P2A6NMY6 339 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 M0R1W7 72 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 AKR7A2O43488 359 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 SOX14O95416 240 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 ACKR3P25106 362 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 GABRA5P31644 462 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 PPP1R8Q12972 351 aaKnown RBP18.47■□□□□ 0.55
USP4-208ENST00000464168 PRDX4Q13162 271 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 ERI1Q8IV48 349 aaKnown RBP18.47■□□□□ 0.55
USP4-208ENST00000464168 BEND2Q8NDZ0 799 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 OR6N2Q8NGY6 317 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 C17orf50Q8WW18 174 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 PGAM5Q96HS1 289 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 INTS14Q96SY0 518 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 RGCCQ9H4X1 137 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 MED20Q9H944 212 aa18.47■□□□□ 0.55
USP4-208ENST00000464168 NKX6-3A6NJ46 265 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 TMEM210A6NLX4 147 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 ZNF850A8MQ14 1090 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 G3V4G9 280 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 SIGLEC5O15389 551 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 IFNGP01579 166 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 ACAA1P09110 424 aaPredicted RBP18.46■□□□□ 0.55
USP4-208ENST00000464168 GSTT1P30711 240 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 CAV3P56539 151 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 HERPUD1Q15011 391 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 SNCBQ16143 134 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 BEAN1Q3B7T3 259 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 NCR3LG1Q68D85 454 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 HCP5Q6MZN7 132 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 FTMTQ8N4E7 242 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 AJUBAQ96IF1 538 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 CMC2Q9NRP2 79 aa18.46■□□□□ 0.55
USP4-208ENST00000464168 FAM183AA6NL82 134 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 RIIAD1A6NNX1 92 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 H3BUX3 64 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 CST4P01036 141 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 NDUFB7P17568 137 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 DCTDP32321 178 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 MAGEA2P43356 314 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 EFNB2P52799 333 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 FBLN7Q53RD9 439 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 HSP90B2PQ58FF3 399 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 CYP2R1Q6VVX0 501 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 Q6ZTK2 550 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 DUS3LQ96G46 650 aaKnown RBP18.45■□□□□ 0.54
USP4-208ENST00000464168 RNF170Q96K19 258 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 DGCR6LQ9BY27 220 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 VNN3Q9NY84 501 aa18.45■□□□□ 0.54
USP4-208ENST00000464168 TET2Q6N021 2002 aaPredicted RBP18.45■□□□□ 0.54
USP4-208ENST00000464168 A0A1W2PQ09 198 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 H2BFMP0C1H6 154 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 ZNF3P17036 446 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 KIR2DS4P43632 304 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 HIST2H2BDQ6DRA6 164 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 SHFQ7M4L6 423 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 TIGD4Q8IY51 512 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 HPSE2Q8WWQ2 592 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 LYZL4Q96KX0 146 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 SSX3Q99909 188 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 ABCB9Q9NP78 766 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 SF3B6Q9Y3B4 125 aaKnown RBP18.44■□□□□ 0.54
USP4-208ENST00000464168 MAB21L2Q9Y586 359 aa18.44■□□□□ 0.54
USP4-208ENST00000464168 OR2AT4A6NND4 320 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 SNX3O60493 162 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms