RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 MRPL15Q9P015 296 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 A6NNC1 897 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 PDCD5O14737 125 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 IL1AP01583 271 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 ZNF182P17025 639 aaPredicted RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 AZGP1P25311 298 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 BDKRB2P30411 391 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 CNN3Q15417 329 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 CNPY1Q3B7I2 92 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 ZNF672Q499Z4 452 aaPredicted RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 DDI2Q5TDH0 399 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 TMEM42Q69YG0 159 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 UTS2BQ765I0 119 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 OR10AD1Q8NGE0 317 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 ADAT1Q9BUB4 502 aaKnown RBP12.51□□□□□ -0.41
TNF-208ENST00000449264 MSL2Q9HCI7 577 aa12.51□□□□□ -0.41
TNF-208ENST00000449264 LRBAP50851 2863 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 DCHS2Q6V1P9 2916 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 IGLV3-9A0A075B6K5 115 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 PLSCR5A0PG75 271 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 CST4P01036 141 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 IGHV3-13P01766 116 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 ATF1P18846 271 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 ZNF529Q6P280 563 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 TPRA1Q86W33 373 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 NR2C2APQ86WQ0 139 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 JAGN1Q8N5M9 183 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 ACBD4Q8NC06 268 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 OR8G5Q8NG78 346 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 OR52N4Q8NGI2 321 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 LILRB1Q8NHL6 650 aaPredicted RBP12.5□□□□□ -0.41
TNF-208ENST00000449264 GTF3AQ92664 365 aaKnown RBP12.5□□□□□ -0.41
TNF-208ENST00000449264 GFI1Q99684 422 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 TAAR3PQ9P1P4 343 aa12.5□□□□□ -0.41
TNF-208ENST00000449264 CGGBP1Q9UFW8 167 aaPredicted RBP12.5□□□□□ -0.41
TNF-208ENST00000449264 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
TNF-208ENST00000449264 FAM230AA0A1W2PPH8 454 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 VSTM5A8MXK1 200 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 MAGEB3O15480 346 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 ERCC1P07992 297 aaPredicted RBP12.49□□□□□ -0.41
TNF-208ENST00000449264 SERPINF1P36955 418 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 ALDH3B1P43353 468 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 DAZAP2Q15038 168 aaPredicted RBP12.49□□□□□ -0.41
TNF-208ENST00000449264 NKAIN3Q8N8D7 197 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 OR8S1Q8NH09 359 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 DYNC2LI1Q8TCX1 351 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 ITFG2Q969R8 447 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 RFT1Q96AA3 541 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 TMEM100Q9NV29 134 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 SLC7A11Q9UPY5 501 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 MPC1Q9Y5U8 109 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
TNF-208ENST00000449264 H0YL77 283 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 COX6B1P14854 86 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
TNF-208ENST00000449264 OR8G1Q15617 311 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 Q6ZR03 302 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 ITPKCQ96DU7 683 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 BORCS8Q96FH0 119 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 TECTBQ96PL2 329 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 HIST1H2AAQ96QV6 131 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 GPER1Q99527 375 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 PLGRKTQ9HBL7 147 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 V9GY05 133 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 A0A0G2JK05 382 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 A0A1W2PPR1 153 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 MEGF11A6BM72 1044 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 TRIM64BA6NI03 449 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 MLNRO43193 412 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 PRKACBP22694 351 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 SOX6P35712 828 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 ZNF93P35789 620 aaPredicted RBP12.48□□□□□ -0.41
TNF-208ENST00000449264 MMP15P51511 669 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 GPM6AP51674 278 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 HES5Q5TA89 166 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 GLT8D1Q68CQ7 371 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 RNF144BQ7Z419 303 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 OR5D18Q8NGL1 313 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 FBXW5Q969U6 566 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 SPSB1Q96BD6 273 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 BARHL1Q9BZE3 327 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 FGF23Q9GZV9 251 aaPredicted RBP12.48□□□□□ -0.41
TNF-208ENST00000449264 DAPK2Q9UIK4 370 aa12.48□□□□□ -0.41
TNF-208ENST00000449264 AKAP6Q13023 2319 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 ARFGEF3Q5TH69 2177 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 NOTOA8MTQ0 251 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 SPRY3O43610 288 aa12.47□□□□□ -0.41
TNF-208ENST00000449264 PLATP00750 562 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms