RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 THOC3Q96J01 351 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SNX22Q96L94 193 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SERINC2Q96SA4 455 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 SCRT1Q9BWW7 348 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 C2CD4DB7Z1M9 353 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 H3BQ15 152 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 HRKO00198 91 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 EREGO14944 169 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 LDLRAD4O15165 306 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 MBP02144 154 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 LYL1P12980 280 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 PCP4P48539 62 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 EMP2P54851 167 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 ARFRP1Q13795 201 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 ELOBQ15370 118 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 DMRTC1Q5HYR2 192 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 OR52N4Q8NGI2 321 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 TP53TG5Q9Y2B4 290 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 KCNIP3Q9Y2W7 256 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 LRP12Q9Y561 859 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 ABCA7Q8IZY2 2146 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 MEGF11A6BM72 1044 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 BCAT2O15382 392 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 XRCC2O43543 280 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 NUDT21O43809 227 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 HCKP08631 526 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 GABRA4P48169 554 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 HAGHQ16775 308 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 OR5H2Q8NGV7 314 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 KTI12Q96EK9 354 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 MVB12AQ96EY5 273 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 PRRX2Q99811 253 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 PHPT1Q9NRX4 125 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 HIF3AQ9Y2N7 669 aa13.06□□□□□ -0.32
NCKIPSD-204ENST00000416649 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 LOC101059948A0A1B0GTJ6 334 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 MPZL1O95297 269 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 GPR75O95800 540 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 MPIG6BO95866 241 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 ADH1BP00325 375 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 CFPP27918 469 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 THBS4P35443 961 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 RBMXP38159 391 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 FAM3AP98173 230 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 ERV3-1Q14264 604 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 ISXQ2M1V0 245 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 DEFB110Q30KQ9 67 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 TDHQ8IZJ6 230 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 PATE1Q8WXA2 126 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 BANF2Q9H503 90 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 CENPMQ9NSP4 180 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 CD207Q9UJ71 328 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 TCRBV21S2A2A0A5A6 115 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 CEACAM5P06731 702 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 DANCRP0C864 163 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 VSIG8P0DPA2 414 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 AMY2BP19961 511 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 APLNRP35414 380 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 FRZBQ92765 325 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 RAB11FIP5Q9BXF6 653 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 MMP25Q9NPA2 562 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
NCKIPSD-204ENST00000416649 C17orf51A8MQB3 221 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 ADAM10O14672 748 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 NKX2-2O95096 273 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 CTSBP07858 339 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 HPGDP15428 266 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 IGFBP3P17936 291 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 DLK1P80370 383 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 ACY1Q03154 408 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 KCTD18Q6PI47 426 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 METTL27Q8N6F8 245 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 FNDC9Q8TBE3 224 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 MRGPRX1Q96LB2 322 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 ABHD6Q9BV23 337 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 ZNF700Q9H0M5 742 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 SPACA6W5XKT8 324 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 GEMIN2O14893 280 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 CTSVO60911 334 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 SCAF4O95104 1147 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 DIRAS3O95661 229 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 APBB3O95704 486 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 GLI4P10075 376 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 RAB4BP61018 213 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 FOXO1Q12778 655 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 PLXDC2Q6UX71 529 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 LINC00346Q8IVM7 164 aa13.04□□□□□ -0.32
NCKIPSD-204ENST00000416649 COMMD1Q8N668 190 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms