RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ABCD4O14678 606 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 OR7C2O60412 319 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 TOX4O94842 621 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 RAB13P51153 203 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 HGDQ93099 445 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 CXorf58Q96LI9 332 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 TXNIPQ9H3M7 391 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 AQP7P3A6NL99 342 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 ARPC3O15145 178 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 XRCC2O43543 280 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 FGF7P21781 194 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 PCBP4P57723 403 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 KRTDAPP60985 99 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 ANKRD16Q6P6B7 361 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC16A12Q6ZSM3 486 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 USP51Q70EK9 711 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 OR5AS1Q8N127 324 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 ARHGEF39Q8N4T4 335 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 RDH5Q92781 318 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 KCNE1BA0A087WTH5 132 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 RPS27P42677 84 aaKnown RBP11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 CDK5Q00535 292 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 OR2B11Q5JQS5 317 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF574Q6ZN55 896 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 FAM221AA4D161 298 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 KIR2DL1P43626 348 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 PNLIPRP3Q17RR3 467 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 SFTPA1Q8IWL2 248 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 ST8SIA1Q92185 356 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 MAGT1Q9H0U3 335 aa11.06□□□□□ -0.64
NPLOC4-202ENST00000374747 MICAL3Q7RTP6 2002 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 IGHV3-9P01782 118 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC25A6P12236 298 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 CLEC12BQ2HXU8 276 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 HLA-BQ31612 363 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SPRED2Q7Z698 418 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF573Q86YE8 665 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 DOCK6Q96HP0 2047 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 DOCK4Q8N1I0 1966 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 TRAV20A0A0B4J274 112 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 IGHV3-20A0A0C4DH32 117 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 UPK1AO00322 258 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 TBX19O60806 448 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC25A4P12235 298 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 BPIFB3P59826 476 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 CDX2Q99626 313 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 RAB18Q9NP72 206 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 RCL1Q9Y2P8 373 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 MIA3Q5JRA6 1907 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SIRPB1O00241 398 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC17A2O00624 439 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 OR2J2O76002 312 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 OR5G3P0C626 314 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 NDUFB7P17568 137 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 AKR1C3P42330 323 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 VWA2Q5GFL6 755 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 FAM27D1Q5T7N8 215 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 COL13A1Q5TAT6 717 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 RPS19BP1Q86WX3 136 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 M1APQ8TC57 530 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 CNRIP1Q96F85 164 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 MMP26Q9NRE1 261 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SLCO1C1Q9NYB5 712 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 KCNJ3P48549 501 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 PTTG1IPP53801 180 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SHBQ15464 509 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 C12orf73Q69YU5 71 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 C11orf40Q8WZ69 217 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 WDFY2Q96P53 400 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 PRDM7Q9NQW5 492 aa11.05□□□□□ -0.64
NPLOC4-202ENST00000374747 SERTM2A0A1B0GWG4 89 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 PAX6P26367 422 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 RTL8BQ17RB0 113 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 DRAM2Q6UX65 266 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 BTLAQ7Z6A9 289 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 ORAI1Q96D31 301 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 BOD1Q96IK1 185 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 LRRC3BQ96PB8 259 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 TWSG1Q9GZX9 223 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 CACFD1Q9UGQ2 172 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 MEIKINA0A087WXM9 373 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 NDUFB6O95139 128 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 LIMS3P0CW19 117 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 LIMS4P0CW20 117 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 FGF9P31371 208 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 BTG2P78543 158 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 XAF1Q6GPH4 301 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 DND1Q8IYX4 353 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 GPR32P1Q8NGA4 272 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 UCK1Q9HA47 277 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms