RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ZNF275Q9NSD4 429 aaPredicted RBP13.18□□□□□ -0.3
PRPF38B-202ENST00000370022 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
PRPF38B-202ENST00000370022 ANKRD17O75179 2603 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-202ENST00000370022 IGHV1-69-2A0A0G2JMI3 117 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 GATBO75879 557 aaKnown RBP13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 PTBP3O95758 552 aaKnown RBP13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 NRASP01111 189 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 ZNF20P17024 532 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 GATA4P43694 442 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 MAP2K4P45985 399 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 MAB21L1Q13394 359 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 Q5PR19 223 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 CLEC2AQ6UVW9 174 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 ZFP41Q8N8Y5 198 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 OR51A4Q8NGJ6 313 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 OR5P3Q8WZ94 311 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 THRSPQ92748 146 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 UFD1Q92890 307 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 NR1H4Q96RI1 486 aaPredicted RBP13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 MGLLQ99685 303 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 RTL8AQ9BWD3 113 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 CHST5Q9GZS9 411 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 POLQO75417 2590 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 TACC2O95359 2948 aa13.17□□□□□ -0.3
PRPF38B-202ENST00000370022 ANKRD61A6NGH8 418 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 TMEM210A6NLX4 147 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 H3BSH0 61 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 NDUFS8O00217 210 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 CD2P06729 351 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 HSMCR30P0CW71 290 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 PDLIM4P50479 330 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 HFEQ30201 348 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 CEACAM21Q3KPI0 293 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 DNM1P46Q6ZS02 220 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 MS4A15Q8N5U1 240 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 OR5A2Q8NGI9 324 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 OR10AC1Q8NH08 325 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 ITLN1Q8WWA0 313 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 ZNF696Q9H7X3 374 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 CHODLQ9H9P2 273 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 CSMD1Q96PZ7 3565 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 PDZD2O15018 2839 aa13.16□□□□□ -0.3
PRPF38B-202ENST00000370022 OR5B21A6NL26 309 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 LY6HO94772 140 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 OCM2P0CE71 109 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 PCMT1P22061 227 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 TPBGQ13641 420 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 DOC2BQ14184 412 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 CLEC12BQ2HXU8 276 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 UBE2UQ5VVX9 321 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 PLCXD3Q63HM9 321 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 MOB3CQ70IA8 216 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 UTS2BQ765I0 119 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 SERPINA12Q8IW75 414 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 PARP16Q8N5Y8 322 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 OR5D14Q8NGL3 314 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 FAM168AQ92567 244 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 DVL3Q92997 716 aaPredicted RBP13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 FGGYQ96C11 551 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 GCM1Q9NP62 436 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 ITGB1BP2Q9UKP3 347 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 USF3Q68DE3 2245 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 A0A087WXM4 84 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 PNMA8CA0A1B0GUJ8 204 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 CPEP16870 476 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 TMEM33P57088 247 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 GNG3P63215 75 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 ZNF181Q2M3W8 571 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 Q499Y3 187 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 FAM76BQ5HYJ3 339 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 TSPAN14Q8NG11 270 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 HPSE2Q8WWQ2 592 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 HPS1Q92902 700 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 ADAT3Q96EY9 351 aaPredicted RBP13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 RNF170Q96K19 258 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 FN3KRPQ9HA64 309 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 NEK6Q9HC98 313 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 BATF3Q9NR55 127 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 SLC7A11Q9UPY5 501 aa13.15□□□□□ -0.3
PRPF38B-202ENST00000370022 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 LOC100289279A0A1B0GTE1 492 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 A6NIN4 97 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 LRRC30A6NM36 301 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 LMX1BO60663 402 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 CDC14BO60729 498 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 RP2O75695 350 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 ALX3O95076 343 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 COL8A2P25067 703 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 PSMA1P25786 263 aaKnown RBP13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 GIFP27352 417 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 RPS11P62280 158 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms