RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CD200P41217 278 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 PRSS57Q6UWY2 283 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 SERPINA12Q8IW75 414 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 RDH5Q92781 318 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 ERGIC1Q969X5 290 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 FGGYQ96C11 551 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 ITPKCQ96DU7 683 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 MEGF10Q96KG7 1140 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 RTL8AQ9BWD3 113 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 CHST5Q9GZS9 411 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 VCX3AQ9NNX9 186 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 DLL4Q9NR61 685 aa13.19□□□□□ -0.3
TRIM13-201ENST00000356017 NCR1O76036 304 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 CSF3P09919 207 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 CPEP16870 476 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 CRYBB2P43320 205 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 GATA4P43694 442 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 MAB21L1Q13394 359 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 DOC2BQ14184 412 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 TRAM1Q15629 374 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 CEACAM21Q3KPI0 293 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 Q499Y3 187 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 LIPKQ5VXJ0 399 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 SHEQ5VZ18 495 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 MOB3CQ70IA8 216 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 OR5A2Q8NGI9 324 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 OR5D14Q8NGL3 314 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 OR5P3Q8WZ94 311 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
TRIM13-201ENST00000356017 IGHV1-69-2A0A0G2JMI3 117 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 A6NIN4 97 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 PTBP3O95758 552 aaKnown RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 PSMA1P25786 263 aaKnown RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 DSCR9P59020 149 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 HFEQ30201 348 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 ARMCX4Q5H9R4 360 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 PLCXD3Q63HM9 321 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 UTS2BQ765I0 119 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 ITLN1Q8WWA0 313 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 RGP1Q92546 391 aaPredicted RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 ADAT3Q96EY9 351 aaPredicted RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 RNF170Q96K19 258 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 OPALINQ96PE5 141 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 NEK6Q9HC98 313 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 SLC7A11Q9UPY5 501 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 PPP1R3CQ9UQK1 317 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 TRBV5-5A0A0J9YX44 114 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 OR5B21A6NL26 309 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 TMEM210A6NLX4 147 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 LMX1BO60663 402 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 LY6HO94772 140 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 MAPK3P27361 379 aaPredicted RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 ART1P52961 327 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 CNN3Q15417 329 aaKnown RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 CEP78Q5JTW2 689 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 CLEC2AQ6UVW9 174 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 KCTD8Q6ZWB6 473 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 PHC2Q8IXK0 858 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 DVL3Q92997 716 aaPredicted RBP13.17□□□□□ -0.3
TRIM13-201ENST00000356017 TMEM106AQ96A25 262 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 PPP1R3EQ9H7J1 279 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 GCM1Q9NP62 436 aa13.17□□□□□ -0.3
TRIM13-201ENST00000356017 NAV2Q8IVL1 2488 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 OCMP0CE72 109 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-201ENST00000356017 PSMB9P28065 219 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 SOX2P48431 317 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 PDLIM4P50479 330 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 GNG3P63215 75 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 FAM76BQ5HYJ3 339 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 Q5PR19 223 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 HPSE2Q8WWQ2 592 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 TMED9Q9BVK6 235 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 ZCCHC4Q9H5U6 513 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 CHODLQ9H9P2 273 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 FN3KRPQ9HA64 309 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 GPR173Q9NS66 373 aa13.16□□□□□ -0.3
TRIM13-201ENST00000356017 POLQO75417 2590 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 LRRC30A6NM36 301 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 ZNF879B4DU55 563 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 NDUFS8O00217 210 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 CDC14BO60729 498 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 ALX3O95076 343 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 GRPP07492 148 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 PRKACBP22694 351 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 GABRA5P31644 462 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 GPM6AP51674 278 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 FUT6P51993 359 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 TMEM33P57088 247 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 UBE2V2Q15819 145 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 NEDD8Q15843 81 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 CLEC12BQ2HXU8 276 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 SYT6Q5T7P8 510 aaPredicted RBP13.15□□□□□ -0.3
TRIM13-201ENST00000356017 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms