RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 RAB11BQ15907 218 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 DGUOKQ16854 277 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 HAGHLQ6PII5 290 aaPredicted RBP7□□□□□ -1.29
HMGCR-202ENST00000343975 TPRA1Q86W33 373 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 ZNF584Q8IVC4 421 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 PAQR4Q8N4S7 273 aaPredicted RBP7□□□□□ -1.29
HMGCR-202ENST00000343975 MARS2Q96GW9 593 aaKnown RBP7□□□□□ -1.29
HMGCR-202ENST00000343975 TMEM165Q9HC07 324 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 hCG_38984A0A1B0GV85 526 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 ZNF503-AS2A6NEH8 195 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 A6NIN4 97 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 IQCF6A8MYZ5 107 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 CLDN25C9JDP6 229 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 E9PQ18 207 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 CDRT1O95170 752 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 UBBP0CG47 229 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 KIR3DL2P43630 455 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 BMXP51813 675 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 ERVS71-1P61550 626 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 Q8IYB0 196 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 OR10AD1Q8NGE0 317 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 CCL17Q92583 94 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 ERGIC1Q969X5 290 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 MRI1Q9BV20 369 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 CHST5Q9GZS9 411 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 G6PC2Q9NQR9 355 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 NDUFB11Q9NX14 153 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 TAS2R4Q9NYW5 299 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 IL19Q9UHD0 177 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 NOTCH2Q04721 2471 aa7□□□□□ -1.29
HMGCR-202ENST00000343975 WIPF3A6NGB9 483 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 C17orf100A8MU93 164 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 DEFB108AA8MXU0 73 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 FAM25AB3EWG3 89 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 FAM25CB3EWG5 89 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 FAM25GB3EWG6 89 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 PPIHO43447 177 aaKnown RBP6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CDC14BO60729 498 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 HTR3BO95264 441 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CSF3P09919 207 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 ZNF250P15622 560 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 KITLGP21583 273 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 GALP22466 123 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 HAAOP46952 286 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 INPP1P49441 399 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CCL8P80075 99 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 ADIPOQQ15848 244 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 BCL7BQ9BQE9 202 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 RSL24D1Q9UHA3 163 aaKnown RBP6.99□□□□□ -1.29
HMGCR-202ENST00000343975 FOXJ3Q9UPW0 622 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 V9GY05 133 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 PLCE1Q9P212 2302 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 SPG11Q96JI7 2443 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 J3QRE1 110 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 PLAUP00749 431 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 UCHL1P09936 223 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 MPV17P39210 176 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 GPM6AP51674 278 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 PRSS12P56730 875 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
HMGCR-202ENST00000343975 TFF3Q07654 80 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 SMIM21Q3B7S5 101 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 LAIR2Q6ISS4 152 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 TMIGD2Q96BF3 282 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 MYOZ1Q9NP98 299 aaPredicted RBP6.99□□□□□ -1.29
HMGCR-202ENST00000343975 ST6GALNAC2Q9UJ37 374 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 RHBDD3Q9Y3P4 386 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CHD6Q8TD26 2715 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CTAG2O75638 210 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CST4P01036 141 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 GLRA1P23415 457 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 PDLIM4P50479 330 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 RORCP51449 518 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 CDSNQ15517 529 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 IDNKQ5T6J7 187 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 COLCA1Q6ZS62 124 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 DNAAF1Q8NEP3 725 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 OR6M1Q8NGM8 313 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 OR14K1Q8NGZ2 314 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 UBASH3BQ8TF42 649 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 OR2V2Q96R30 315 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 FUNDC2Q9BWH2 189 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 ITGB1BP2Q9UKP3 347 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 KIAA1549Q9HCM3 1950 aa6.99□□□□□ -1.29
HMGCR-202ENST00000343975 NAT2P11245 290 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 SRMP19623 302 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 MNDAP41218 407 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 GPR6P46095 362 aaPredicted RBP6.98□□□□□ -1.29
HMGCR-202ENST00000343975 NKX6-1P78426 367 aaPredicted RBP6.98□□□□□ -1.29
HMGCR-202ENST00000343975 ARL6IP1Q15041 203 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 EFNB3Q15768 340 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 UTS2BQ765I0 119 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 PRSS35Q8N3Z0 413 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 CHST4Q8NCG5 386 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 ZNF420Q8TAQ5 688 aaPredicted RBP6.98□□□□□ -1.29
HMGCR-202ENST00000343975 C17orf50Q8WW18 174 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 RDH5Q92781 318 aa6.98□□□□□ -1.29
HMGCR-202ENST00000343975 NEDD4LQ96PU5 975 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms