RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MXD1Q05195 221 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 PRDX4Q13162 271 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 Q6ZR03 302 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 USP43Q70EL4 1123 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 OR8G5Q8NG78 346 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 FGF23Q9GZV9 251 aaPredicted RBP18.37■□□□□ 0.53
TPM1-204ENST00000334895 CISD1Q9NZ45 108 aaKnown RBP18.37■□□□□ 0.53
TPM1-204ENST00000334895 CKLFQ9UBR5 152 aa18.37■□□□□ 0.53
TPM1-204ENST00000334895 SULT1B1O43704 296 aa18.36■□□□□ 0.53
TPM1-204ENST00000334895 NRASP01111 189 aa18.36■□□□□ 0.53
TPM1-204ENST00000334895 OR10A3P58181 314 aa18.36■□□□□ 0.53
TPM1-204ENST00000334895 RNF144BQ7Z419 303 aa18.36■□□□□ 0.53
TPM1-204ENST00000334895 DNAAF1Q8NEP3 725 aa18.36■□□□□ 0.53
TPM1-204ENST00000334895 GTF3AQ92664 365 aaKnown RBP18.36■□□□□ 0.53
TPM1-204ENST00000334895 AK6Q9Y3D8 172 aaKnown RBP18.36■□□□□ 0.53
TPM1-204ENST00000334895 NBPF19A0A087WUL8 3843 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 A0A0G2JK05 382 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 FAM221AA4D161 298 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 ANKRD30BLA7E2S9 258 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 NCR1O76036 304 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 ATF1P18846 271 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 RAB3AP20336 220 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 CA6P23280 308 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 MMP15P51511 669 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 CAV3P56539 151 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 FTMTQ8N4E7 242 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 NPRL2Q8WTW4 380 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 HPSE2Q8WWQ2 592 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 PLK3Q9H4B4 646 aa18.35■□□□□ 0.53
TPM1-204ENST00000334895 FLNBO75369 2602 aaKnown RBP18.35■□□□□ 0.53
TPM1-204ENST00000334895 A0A1B0GWJ7 208 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 ALX3O95076 343 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 IL1AP01583 271 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 PPP3R1P63098 170 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 CRIP3Q6Q6R5 217 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 MOB3CQ70IA8 216 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 LYPD6Q86Y78 171 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 OR52N4Q8NGI2 321 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 DYNC2LI1Q8TCX1 351 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 ITPKCQ96DU7 683 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 NKX3-1Q99801 234 aaPredicted RBP18.34■□□□□ 0.53
TPM1-204ENST00000334895 DHRS9Q9BPW9 319 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 SLITRK2Q9H156 845 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 TPK1Q9H3S4 243 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 MSL2Q9HCI7 577 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 TAAR3PQ9P1P4 343 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 H0YL77 283 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 MLNRO43193 412 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 BDKRB2P30411 391 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 APOBEC3AP31941 199 aaPredicted RBP18.34■□□□□ 0.53
TPM1-204ENST00000334895 SERPINF1P36955 418 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 PLCXD3Q63HM9 321 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 TPRA1Q86W33 373 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 ZDHHC23Q8IYP9 409 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 TMEM138Q9NPI0 162 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 MPC1Q9Y5U8 109 aa18.34■□□□□ 0.53
TPM1-204ENST00000334895 SETXQ7Z333 2677 aaKnown RBP18.33■□□□□ 0.53
TPM1-204ENST00000334895 ZSCAN5BA6NJL1 495 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 PRF1P14222 555 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 ZNF182P17025 639 aaPredicted RBP18.33■□□□□ 0.52
TPM1-204ENST00000334895 RAB3BP20337 219 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 AZGP1P25311 298 aaKnown RBP18.33■□□□□ 0.52
TPM1-204ENST00000334895 MST1LQ2TV78 715 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 ZNF787Q6DD87 383 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 OR5P3Q8WZ94 311 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 SPACA5Q96QH8 159 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 DCUN1D5Q9BTE7 237 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 BARHL1Q9BZE3 327 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 DCHS2Q6V1P9 2916 aa18.33■□□□□ 0.52
TPM1-204ENST00000334895 CACNA1DQ01668 2161 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 RAI1Q7Z5J4 1906 aaPredicted RBP18.32■□□□□ 0.52
TPM1-204ENST00000334895 IGKV1-27A0A075B6S5 117 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 VSTM5A8MXK1 200 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 CD37P11049 281 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 ALDH3B1P43353 468 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 EVX1P49640 407 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 SELENOVP59797 346 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 EFNB3Q15768 340 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 CNPY1Q3B7I2 92 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 TRMT10AQ8TBZ6 339 aaKnown RBP18.32■□□□□ 0.52
TPM1-204ENST00000334895 SLC25A46Q96AG3 418 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 TMEM100Q9NV29 134 aa18.32■□□□□ 0.52
TPM1-204ENST00000334895 COX6B1P14854 86 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 CNN3Q15417 329 aaKnown RBP18.31■□□□□ 0.52
TPM1-204ENST00000334895 CEACAM21Q3KPI0 293 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 DDI2Q5TDH0 399 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 OR10AD1Q8NGE0 317 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 SPSB1Q96BD6 273 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 TECTBQ96PL2 329 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 ADAT1Q9BUB4 502 aaKnown RBP18.31■□□□□ 0.52
TPM1-204ENST00000334895 CGGBP1Q9UFW8 167 aaPredicted RBP18.31■□□□□ 0.52
TPM1-204ENST00000334895 MEGF11A6BM72 1044 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 ANXA2P2A6NMY6 339 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 PDCD5O14737 125 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 HS3ST1O14792 307 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 CTAG2O75638 210 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 ALDOBP05062 364 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 THBS2P35442 1172 aa18.31■□□□□ 0.52
TPM1-204ENST00000334895 HNRNPA0Q13151 305 aaKnown RBP18.31■□□□□ 0.52
TPM1-204ENST00000334895 NKAIN3Q8N8D7 197 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms