RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FAM230AA0A1W2PPH8 454 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 EFCAB10A6NFE3 127 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ANKRD61A6NGH8 418 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 TMEM210A6NLX4 147 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 B4DSR2 109 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ZNF732B4DXR9 585 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 FAM157AC9JC47 383 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 PTGES3LE9PB15 166 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 C3orf80F5H4A9 247 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 J3QRE1 110 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 CDIPTO14735 213 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 LMX1BO60663 402 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 PLATP00750 562 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 SERPINA3P01011 423 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 CST4P01036 141 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 NRASP01111 189 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 IGHV2-70P01814 119 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 IGHA1P01876 353 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 CCDC159P0C7I6 412 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ATP6V1B1P15313 513 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ZNF12P17014 697 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 DCKP27707 260 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 THBS2P35442 1172 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 VHLP40337 213 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ETV1P50549 477 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 LCN2P80188 198 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 HOXA4Q00056 320 aaPredicted RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 ST3GAL4Q11206 333 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 MRPL28Q13084 256 aaKnown RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 ZNF154Q13106 437 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ALKBH1Q13686 389 aaKnown RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 ZMYND11Q15326 602 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ESCO2Q56NI9 601 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 CLVS2Q5SYC1 327 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR2G6Q5TZ20 316 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 TMEM244Q5VVB8 128 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 NLRC3Q7RTR2 1065 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 WDR86Q86TI4 376 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 RDH10Q8IZV5 341 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 SYS1Q8N2H4 156 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR1M1Q8NGA1 313 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR14K1Q8NGZ2 314 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR2G2Q8NGZ5 317 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR51F2Q8NH61 342 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR5AK2Q8NH90 309 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 OR5P3Q8WZ94 311 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 TFAP2CQ92754 450 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 GGHQ92820 318 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 RPL3LQ92901 407 aaKnown RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 ERGIC1Q969X5 290 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ITPKCQ96DU7 683 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 PELI1Q96FA3 418 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 METTL17Q9H7H0 456 aaPredicted RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 FGF20Q9NP95 211 aaPredicted RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 TRIM36Q9NQ86 728 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 SCN3BQ9NY72 215 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 FRRS1LQ9P0K9 344 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 DIMT1Q9UNQ2 313 aaKnown RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 SLC7A11Q9UPY5 501 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 PRRC2AP48634 2157 aaKnown RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 HEATR1Q9H583 2144 aaKnown RBP5.5□□□□□ -1.53
CD44-204ENST00000279452 CADP27708 2225 aa5.5□□□□□ -1.53
CD44-204ENST00000279452 ITPR2Q14571 2701 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 TRBV2A0A0J9YWF9 115 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 A0A1B0GTI1 187 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 PNMA8CA0A1B0GUJ8 204 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 OR5B21A6NL26 309 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CEACAM18A8MTB9 384 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 E9PI62 339 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 H0YJX3 145 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 SLC1A7O00341 560 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 GATBO75879 557 aaKnown RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 INMTO95050 263 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 IGHV2-5P01817 119 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 GYPAP02724 150 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 MSMBP08118 114 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 LIMS3P0CW19 117 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 LIMS4P0CW20 117 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 HNF1AP20823 631 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 EEF1B2P24534 225 aaKnown RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 PMELP40967 661 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 GATA4P43694 442 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 HAAOP46952 286 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 SOX2P48431 317 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 GTF2A1P52655 376 aaPredicted RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 NANOS3P60323 173 aaKnown RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 GNB2P62879 340 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 GNG3P63215 75 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 KRTAP1-1Q07627 177 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 RIPK1Q13546 671 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CNN3Q15417 329 aaKnown RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 KCNJ8Q15842 424 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 ZNF181Q2M3W8 571 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CEACAM21Q3KPI0 293 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 TMEM155Q4W5P6 130 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 ZBTB37Q5TC79 503 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 FAHD2BQ6P2I3 314 aaPredicted RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 HAGHLQ6PII5 290 aaPredicted RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 WDR82Q6UXN9 313 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms