RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TRMT61AQ96FX7 289 aaKnown RBP23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 OR51E2Q9H255 320 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 ZDHHC8Q9ULC8 765 aa23.18■■□□□ 1.3
CHMP4B-201ENST00000217402 ABCA12Q86UK0 2595 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 UNC79Q9P2D8 2635 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 IGHV3-64DA0A0J9YX35 117 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 ANXA2P2A6NMY6 339 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 PIN1P1O15428 100 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 UBE2V2Q15819 145 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 ASPHD2Q6ICH7 369 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 UNQ9370/PRO34162Q6UXP9 181 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 KRT74Q7RTS7 529 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 GPR141Q7Z602 305 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 OR5D14Q8NGL3 314 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 HPSE2Q8WWQ2 592 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 ITPKCQ96DU7 683 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 DSCAMO60469 2012 aa23.17■■□□□ 1.3
CHMP4B-201ENST00000217402 A0A1B0GWJ7 208 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 GATBO75879 557 aaKnown RBP23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 CRYBB2P43320 205 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 CD200R1LQ6Q8B3 271 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 THRSPQ92748 146 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 HIST1H2AAQ96QV6 131 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 CHCHD6Q9BRQ6 235 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 PPIL3Q9H2H8 161 aaKnown RBP23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 ZCCHC4Q9H5U6 513 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 FBXO9Q9UK97 447 aaPredicted RBP23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 PLEKHA6Q9Y2H5 1048 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 CACNA1DQ01668 2161 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 ARFGEF3Q5TH69 2177 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 BAHCC1Q9P281 2608 aa23.16■■□□□ 1.3
CHMP4B-201ENST00000217402 GPX5O75715 221 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 CCL8P80075 99 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 UTS2BQ765I0 119 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 TRMT10AQ8TBZ6 339 aaKnown RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 IGFBPL1Q8WX77 278 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 OR5P3Q8WZ94 311 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 NOP16Q9Y3C1 178 aaKnown RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 TRAV8-7A0A075B6U6 113 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 LOC100506127A0A0U1RQW1 187 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 TRDV1A0A1B0GX56 115 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 TPD52L2O43399 206 aaKnown RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 OCMP0CE72 109 aaPredicted RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 TNFAIP6P98066 277 aaPredicted RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 C22orf42Q6IC83 251 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 RPL3LQ92901 407 aaKnown RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 FUNDC2Q9BWH2 189 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 FGF23Q9GZV9 251 aaPredicted RBP23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 CKLFQ9UBR5 152 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 SSR3Q9UNL2 185 aa23.15■■□□□ 1.3
CHMP4B-201ENST00000217402 IGKV1-9A0A0C4DH69 117 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 RAF1P04049 648 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 UCHL1P09936 223 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 TNFSF4P23510 183 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 PPP3R1P63098 170 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 CEACAM21Q3KPI0 293 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 HSD17B12Q53GQ0 312 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 SPRNQ5BIV9 151 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 SATL1Q86VE3 508 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 OR51A2Q8NGJ7 313 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 SORCS2Q96PQ0 1159 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 OR2V2Q96R30 315 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 DIRC2Q96SL1 478 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 MICU1Q9BPX6 476 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 RTL8AQ9BWD3 113 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 CXorf56Q9H5V9 222 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 ABCB9Q9NP78 766 aa23.14■■□□□ 1.29
CHMP4B-201ENST00000217402 H7C417 338 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 OVOL3O00110 214 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 SULT1B1O43704 296 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 ADH4P08319 380 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 ATF1P18846 271 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 RAB3AP20336 220 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 CALRP27797 417 aaKnown RBP23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 THBS2P35442 1172 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 GPM6AP51674 278 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 CNN3Q15417 329 aaKnown RBP23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 OR1M1Q8NGA1 313 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 RNF170Q96K19 258 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 RAB1BQ9H0U4 201 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 CXXC4Q9H2H0 198 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 DECR2Q9NUI1 292 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 SLC7A11Q9UPY5 501 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 SPG11Q96JI7 2443 aa23.13■■□□□ 1.29
CHMP4B-201ENST00000217402 FAM230AA0A1W2PPH8 454 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 FSTP19883 344 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 MAB21L1Q13394 359 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 PCGF3Q3KNV8 242 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 SPERTQ8NA61 448 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 ITLN1Q8WWA0 313 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 TECTBQ96PL2 329 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 TXNL4BQ9NX01 149 aaKnown RBP23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 NKIRAS2Q9NYR9 191 aa23.12■■□□□ 1.29
CHMP4B-201ENST00000217402 AIREO43918 545 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 NCR1O76036 304 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 IGFBP3P17936 291 aaPredicted RBP23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 GALP22466 123 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 AZGP1P25311 298 aaKnown RBP23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 FAM209AQ5JX71 171 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms