RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CNIH2Q6PI25 160 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 RNF144BQ7Z419 303 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 NKAIN3Q8N8D7 197 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 OR14K1Q8NGZ2 314 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 LGALS14Q8TCE9 139 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 STARD4Q96DR4 205 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 SLC25A38Q96DW6 304 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 ZFP3Q96NJ6 502 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 SRRQ9GZT4 340 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 PPP1R3EQ9H7J1 279 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 NPDC1Q9NQX5 325 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 PLSCR4Q9NRQ2 329 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 SPATA2Q9UM82 520 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 PROCRQ9UNN8 238 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CELSR1Q9NYQ6 3014 aa8.23□□□□□ -1.09
PDLIM5-223ENST00000627587 CIB4A0PJX0 185 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 DHRS3O75911 302 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 CALCBP10092 127 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 COX5AP20674 150 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 TIMP3P35625 211 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 DDOSTP39656 456 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 SPOCK1Q08629 439 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 PMPCAQ10713 525 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 PLA2G7Q13093 441 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 CRIP3Q6Q6R5 217 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 METAP1DQ6UB28 335 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 COLCA1Q6ZS62 124 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 PGAP1Q75T13 922 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 TMEM200AQ86VY9 491 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 CCDC36Q8IYA8 594 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 GABRG1Q8N1C3 465 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 OR2AE1Q8NHA4 323 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 SLC25A28Q96A46 364 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 SGK3Q96BR1 496 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 CCDC32Q9BV29 185 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 CXXC4Q9H2H0 198 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 CYSLTR2Q9NS75 346 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 STEAP1Q9UHE8 339 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF391Q9UJN7 358 aa8.22□□□□□ -1.09
PDLIM5-223ENST00000627587 LOC390937A0A1W2PQ73 354 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 NKX2-6A6NCS4 301 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 FAM90A27PA6NNH2 459 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 RAD51DO75771 328 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 UPK1BO75841 260 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 LYZL6O75951 148 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 APOA1P02647 267 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 ERCC1P07992 297 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 RAB3AP20336 220 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 CCNOP22674 350 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 ACKR3P25106 362 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 PTBP1P26599 531 aaKnown RBP eCLIP8.21□□□□□ -1.099e-7■■■■□ 21.6
PDLIM5-223ENST00000627587 STOMP27105 288 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 BDKRB2P30411 391 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 HOXC12P31275 282 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 SCAND1P57086 179 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 UBE2NP61088 152 aaKnown RBP8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 IL18Q14116 193 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 BAK1Q16611 211 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 ZNF181Q2M3W8 571 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 STEAP3Q658P3 488 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 BIVMQ86UB2 503 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 MYPOPQ86VE0 399 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 OR1M1Q8NGA1 313 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 OR13C9Q8NGT0 318 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 FOXRED1Q96CU9 486 aaPredicted RBP8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 C10orf35Q96D05 121 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 LRRC46Q96FV0 321 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 REEP6Q96HR9 211 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 CMTM3Q96MX0 182 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 C1QTNF5Q9BXJ0 243 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 RGCCQ9H4X1 137 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 TMEM138Q9NPI0 162 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 ABCB10Q9NRK6 738 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 EXTL2Q9UBQ6 330 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 OR5V1Q9UGF6 321 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 V9GYS6 101 aa8.21□□□□□ -1.09
PDLIM5-223ENST00000627587 IGKV1-9A0A0C4DH69 117 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 C5orf49A4QMS7 147 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 DHRS7CA6NNS2 312 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 SLC17A2O00624 439 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 XRCC2O43543 280 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 CCL2P13500 99 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 FOSL1P15407 271 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 AZGP1P25311 298 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 APLNRP35414 380 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 PRSS12P56730 875 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 TSC22D1Q15714 1073 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 RAB11BQ15907 218 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 GABRA6Q16445 453 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 UBE2NLQ5JXB2 153 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 TGIF2LYQ8IUE0 185 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 LYSMD2Q8IV50 215 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 OR5AS1Q8N127 324 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 PAQR4Q8N4S7 273 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 JAGN1Q8N5M9 183 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 GDPD1Q8N9F7 314 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms