RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	ADAM19	Q9H013	955 aa		12.78	□□□□□ -0.36
SYNRG-231	ENST00000622045	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045		K7EPK0	472 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	LDLRAD4	O15165	306 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	SFT2D2	O95562	160 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	HKR1	P10072	659 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	PAX6	P26367	422 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	CAMLG	P49069	296 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	KLHL24	Q6TFL4	600 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	FAM71E2	Q8N5Q1	922 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	TSLP	Q969D9	159 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	C8orf44	Q96CB5	159 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	BSCL2	Q96G97	398 aa	Predicted RBP	12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	SLC46A1	Q96NT5	459 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	ST6GALNAC5	Q9BVH7	336 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	BANF2	Q9H503	90 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	PARP11	Q9NR21	331 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	GFOD1	Q9NXC2	390 aa		12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.77	□□□□□ -0.36
SYNRG-231	ENST00000622045	NUDT21	O43809	227 aa	Known RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	SLC37A1	P57057	533 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	FMOD	Q06828	376 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	PLCXD2	Q0VAA5	305 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	C14orf28	Q4W4Y0	310 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	ADAMTS18	Q8TE60	1221 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	CA5BP1	Q8WTZ4	195 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	GTF3A	Q92664	365 aa	Known RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	ZDHHC12	Q96GR4	267 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	TAAR9	Q96RI9	348 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	SUCNR1	Q9BXA5	334 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	SLC26A1	Q9H2B4	701 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	KCNJ16	Q9NPI9	418 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	GAR1	Q9NY12	217 aa	Known RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	CLDN16	Q9Y5I7	305 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	IGLV1-36	A0A0B4J1U3	117 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	SYT7	O43581	403 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	TMEM33	P57088	247 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	TAS2R31	P59538	309 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	IGLV3-21	P80748	117 aa	Predicted RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	IAH1	Q2TAA2	248 aa	Predicted RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	C1orf140	Q5VVS0	124 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	ZNF343	Q6P1L6	599 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	FAHD2B	Q6P2I3	314 aa	Predicted RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	FAHD2A	Q96GK7	314 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	C2orf50	Q96LR7	162 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	DOK5	Q9P104	306 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	RANBP2	P49792	3224 aa	Known RBP	12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	CHD9	Q3L8U1	2897 aa		12.77	□□□□□ -0.37
SYNRG-231	ENST00000622045	NPIPA5	E9PKD4	350 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	MPIG6B	O95866	241 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	EMP2	P54851	167 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	GAMT	Q14353	236 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	RSU1	Q15404	277 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	SURF2	Q15527	256 aa	Predicted RBP	12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	HIST2H3A	Q71DI3	136 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	NKAIN3	Q8N8D7	197 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	OR56B1	Q8NGI3	324 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	OR5B2	Q96R09	309 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	NPIPA1	Q9UND3	350 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	SLC5A6	Q9Y289	635 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	WISP1	O95388	367 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	MT-ATP6	P00846	226 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	VSIG8	P0DPA2	414 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	HLA-DOB	P13765	273 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	IGFBP3	P17936	291 aa	Predicted RBP	12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	SUPT4H1	P63272	117 aa	Known RBP	12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	ZNF239	Q16600	458 aa	Known RBP	12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	CYB5R2	Q6BCY4	276 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	ANGPTL5	Q86XS5	388 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	UBAC2	Q8NBM4	344 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	MR1	Q95460	341 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	FBRS	Q9HAH7	460 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	POLR1D	Q9Y2S0	133 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	RTTN	Q86VV8	2226 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	BLACE	A4D250	179 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	C5orf67	F2Z3F1	127 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	CST4	P01036	141 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	HOXA5	P20719	270 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	CFP	P27918	469 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	RABIF	P47224	123 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	ZNF84	P51523	738 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	SPNS3	Q6ZMD2	512 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	SLC39A7	Q92504	469 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	C5orf34	Q96MH7	638 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	GPR61	Q9BZJ8	451 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	RAB18	Q9NP72	206 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	ZNF107	Q9UII5	783 aa	Predicted RBP	12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045	FANCM	Q8IYD8	2048 aa		12.76	□□□□□ -0.37
SYNRG-231	ENST00000622045		A0A1W2PP11	408 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	TCRBV21S2A2	A0A5A6	115 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	SEMA4F	O95754	770 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	THEGL	P0DJG4	465 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	RAP1A	P62834	184 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	PHF19	Q5T6S3	580 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	SLC22A18AS	Q8N1D0	253 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	MFSD8	Q8NHS3	518 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	GPR119	Q8TDV5	335 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	ERGIC1	Q969X5	290 aa		12.75	□□□□□ -0.37
SYNRG-231	ENST00000622045	TCTN2	Q96GX1	697 aa		12.75	□□□□□ -0.37

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