RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 TMEM95Q3KNT9 176 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 OR4C11Q6IEV9 310 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 OR2C3Q8N628 320 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 SPACA9Q96E40 222 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 MED13Q9UHV7 2174 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 TFAP2EQ6VUC0 442 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 CPEB2Q7Z5Q1 589 aaKnown RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 RSPO3Q9BXY4 272 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 CHODLQ9H9P2 273 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 MSRAQ9UJ68 235 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 NSG1A0A0A6YYJ2 146 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 ACVR1Q04771 509 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 SOX4Q06945 474 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 PMVKQ15126 192 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 PAQR6Q6TCH4 344 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 TMEM64Q6YI46 380 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 GALNT16Q8N428 558 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF418Q8TF45 676 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 TMPRSS13Q9BYE2 586 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 ADGRL4Q9HBW9 690 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 CHST11Q9NPF2 352 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 COCHO43405 550 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 MOB3CQ70IA8 216 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 TBC1D26Q86UD7 250 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 SPANXN5Q5MJ07 72 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 RPEQ96AT9 228 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 SHDQ96IW2 340 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 GPR137Q96N19 417 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 H3BMH7 237 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 CRYBA1P05813 215 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF93P35789 620 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 CIRBPQ14011 172 aaKnown RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 OR2AK2Q8NG84 335 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 OR10G8Q8NGN5 311 aa8.45□□□□□ -1.06
COL12A1-211ENST00000615798 DPH2Q9BQC3 489 aaPredicted RBP8.45□□□□□ -1.06
COL12A1-211ENST00000615798 ZBTB42B2RXF5 422 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 SMPD2O60906 423 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 OR2T7P0C7T2 308 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 DRD1P21728 446 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 SRSF5Q13243 272 aaKnown RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 SLC22A12Q96S37 553 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 RBKSQ9H477 322 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 FCARP24071 287 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 ELOCQ15369 112 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 SUSD1Q6UWL2 747 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 TCEAL8Q8IYN2 117 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 OR11L1Q8NGX0 322 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 GIMAP2Q9UG22 337 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 PTHP01270 115 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 PNLIPRP2P54317 469 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 AWAT1Q58HT5 328 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 NEIL1Q96FI4 390 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 GMPPAQ96IJ6 420 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 GUCD1Q96NT3 240 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 ELOVL5Q9NYP7 299 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 MUTYHQ9UIF7 546 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 MCTS1Q9ULC4 181 aaKnown RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 A0A0D9SEW6 157 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 SPINT2O43291 252 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 TBX18O95935 607 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 ACHEP22303 614 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 CD96P40200 585 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 LYG2Q86SG7 212 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 EDAQ92838 391 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 RNF2Q99496 336 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 ADAT1Q9BUB4 502 aaKnown RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 MRPL16Q9NX20 251 aaKnown RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 RPS15AP62244 130 aaKnown RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 PWWP2BQ6NUJ5 590 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 HMGN2P46Q86SG4 172 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 DNASE2BQ8WZ79 361 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 PSENENQ9NZ42 101 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 A4GNTQ9UNA3 340 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 GPR37L1O60883 481 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 RNF165Q6ZSG1 346 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 EMG1Q92979 244 aaKnown RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 UFC1Q9Y3C8 167 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 C4orf47A7E2U8 309 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 ACOT8O14734 319 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 POU3F3P20264 500 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 HLA-DRB3P79483 266 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 TNFRSF14Q92956 283 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 NCKAP5O14513 1909 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 ATAD5Q96QE3 1844 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 FOXE1O00358 373 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-211ENST00000615798 RGNQ15493 299 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 Q8WTZ3 238 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 EPHX3Q9H6B9 360 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 CSNK1G3Q9Y6M4 447 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 IGLV3-10A0A075B6K4 115 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 MFNGO00587 321 aa8.44□□□□□ -1.06
COL12A1-211ENST00000615798 SCO2O43819 266 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms