RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CPNE4Q96A23 557 aaPredicted RBP19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 FBXO17Q96EF6 278 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 ARSGQ96EG1 525 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 NUDT16L1Q9BRJ7 211 aaKnown RBP19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 SEC16AO15027 2179 aa19.46■□□□□ 0.71
POLR2J3-220ENST00000613744 A0A1W2PPH5 198 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 TMEM235A6NFC5 223 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 MSGN1A6NI15 193 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 ARGFXA6NJG6 315 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 KCNAB3O43448 404 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 NSA2O95478 260 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 RENP00797 406 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 CST4P01036 141 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 CSN2P05814 226 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 UCP2P55851 309 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 MGAT2Q10469 447 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 EEF1A1P5Q5VTE0 462 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 MDGA2Q7Z553 956 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 TRAPPC6BQ86SZ2 158 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 PLPP7Q8NBV4 271 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 ADAD2Q8NCV1 583 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 TMEM52Q8NDY8 209 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 OR56B1Q8NGI3 324 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 OR1J1Q8NGS3 322 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 OTOSQ8NHW6 89 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 TSSK2Q96PF2 358 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 LMF2Q9BU23 707 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 RAB22AQ9UL26 194 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 CELSR3Q9NYQ7 3312 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 FREM2Q5SZK8 3169 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 AKR1C4P17516 323 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 BTF3P20290 206 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 CDX1P47902 265 aaPredicted RBP19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 ID2Q02363 134 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 ERV3-1Q14264 604 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 ZNF239Q16600 458 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 TMEM268Q5VZI3 342 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 LCN10Q6JVE6 187 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 RHBDD2Q6NTF9 364 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 ETV3LQ6ZN32 361 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 KDM8Q8N371 416 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 NKAIN3Q8N8D7 197 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 CTHRC1Q96CG8 243 aa19.45■□□□□ 0.7
POLR2J3-220ENST00000613744 A0A1B0GX78 115 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 CEACAM18A8MTB9 384 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 GPR75O95800 540 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 IFNA6P05013 189 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 KLK3P07288 261 aaPredicted RBP19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ITGA3P26006 1051 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 FOXL2P58012 376 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 CTXN1P60606 82 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ALG10Q5BKT4 473 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 NSUN5P2Q63ZY6 315 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 DPY19L4Q7Z388 723 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ZNF440Q8IYI8 595 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 S100A13Q99584 98 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 WDR77Q9BQA1 342 aaPredicted RBP19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 SRA1Q9HD15 236 aaKnown RBP19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 SDHAF3Q9NRP4 125 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 SRPK3Q9UPE1 567 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 MRPS18BQ9Y676 258 aaKnown RBP19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 FER1L5A0AVI2 2057 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 CYR61O00622 381 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 SFT2D2O95562 160 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 IFNA10P01566 189 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 SNRNP70P08621 437 aaKnown RBP19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 SELLP14151 372 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ID4P47928 161 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ZNF124Q15973 351 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 C9orf152Q5JTZ5 239 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 PNLDC1Q8NA58 520 aaKnown RBP19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ASB5Q8WWX0 329 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 FN3KRPQ9HA64 309 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 ELOVL3Q9HB03 270 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 OR2S2Q9NQN1 319 aa19.44■□□□□ 0.7
POLR2J3-220ENST00000613744 RAB38P57729 211 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 EXOSC7Q15024 291 aaKnown RBP19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 MOGAT2Q3SYC2 334 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 AKIRIN2Q53H80 203 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 ZNF679Q8IYX0 411 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 SECTM1Q8WVN6 248 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 FAM46BQ96A09 425 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 C2orf50Q96LR7 162 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 SCGB3A2Q96PL1 93 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 PARPBPQ9NWS1 579 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 OR5AC2Q9NZP5 309 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 ZNF346Q9UL40 294 aaKnown RBP19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 GTF2A1LQ9UNN4 478 aa19.43■□□□□ 0.7
POLR2J3-220ENST00000613744 PNMTP11086 282 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 S100A2P29034 98 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 ZNF74Q16587 644 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 ODF4Q2M2E3 257 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 GXYLT1Q4G148 440 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 TMEM164Q5U3C3 297 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 C3orf49Q96BT1 292 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 SLC46A1Q96NT5 459 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 RSRP1Q9BUV0 290 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 DDA1Q9BW61 102 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 CHST5Q9GZS9 411 aa19.42■□□□□ 0.7
POLR2J3-220ENST00000613744 TAS2R4Q9NYW5 299 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms