RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TSTQ16762 297 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 KRT74Q7RTS7 529 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 OR10AD1Q8NGE0 317 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 PIGCQ92535 297 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 PIGTQ969N2 578 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 ADAT3Q96EY9 351 aaPredicted RBP17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 PAPOLGQ9BWT3 736 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 MS4A5Q9H3V2 200 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 USF3Q68DE3 2245 aa17.02■□□□□ 0.32
SHKBP1-222ENST00000600320 SPG11Q96JI7 2443 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 ZNF850A8MQ14 1090 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 CST4P01036 141 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 BMP4P12644 408 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 CPEP16870 476 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 DNASE1P24855 282 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 SOX2P48431 317 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 PRDX4Q13162 271 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 SSX1Q16384 188 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 ARMCX4Q5H9R4 360 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 LIPKQ5VXJ0 399 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 LURAP1LQ8IV03 231 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 CCDC54Q8NEL0 328 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 OR2Z1Q8NG97 314 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 OR13C3Q8NGS6 347 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 OR13G1Q8NGZ3 307 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 FCGR1BQ92637 280 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 UFD1Q92890 307 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 FGF23Q9GZV9 251 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 ZNF701Q9NV72 531 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 ENPP5Q9UJA9 477 aa17.01■□□□□ 0.31
SHKBP1-222ENST00000600320 ITPR2Q14571 2701 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 TRBV5-5A0A0J9YX44 114 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ZNF816-ZNF321PA0A0X1KG74 233 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 DHRS7CA6NNS2 312 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 NCR1O76036 304 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 LY6HO94772 140 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ADH4P08319 380 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 PSMB9P28065 219 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ZMAT1Q5H9K5 638 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 DMRTC1Q5HYR2 192 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ZBTB37Q5TC79 503 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 TMEM42Q69YG0 159 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 CDH24Q86UP0 819 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 PHC2Q8IXK0 858 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 UBASH3BQ8TF42 649 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ITFG2Q969R8 447 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 FGGYQ96C11 551 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ELMOD3Q96FG2 381 aa17■□□□□ 0.31
SHKBP1-222ENST00000600320 ADAT1Q9BUB4 502 aaKnown RBP17■□□□□ 0.31
SHKBP1-222ENST00000600320 ZNF275Q9NSD4 429 aaPredicted RBP17■□□□□ 0.31
SHKBP1-222ENST00000600320 FBXO9Q9UK97 447 aaPredicted RBP17■□□□□ 0.31
SHKBP1-222ENST00000600320 SF3B6Q9Y3B4 125 aaKnown RBP17■□□□□ 0.31
SHKBP1-222ENST00000600320 F5H5P2 479 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 CD55P08174 381 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 ZNF12P17014 697 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 PTH2RP49190 550 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 GP2P55259 537 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 RPS25P62851 125 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 GPR50Q13585 617 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 INSL4Q14641 139 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 OR8G1Q15617 311 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 YIF1BQ5BJH7 314 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 GPR148Q8TDV2 347 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 TSEN15Q8WW01 171 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 MUL1Q969V5 352 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 TMED9Q9BVK6 235 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 RAB1BQ9H0U4 201 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 PLEKHA1Q9HB21 404 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 GPR173Q9NS66 373 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 NKIRAS2Q9NYR9 191 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 ZDHHC8Q9ULC8 765 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 DHDHQ9UQ10 334 aa16.99■□□□□ 0.31
SHKBP1-222ENST00000600320 ABCA12Q86UK0 2595 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 IGHV3-64DA0A0J9YX35 117 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 IGHV4-39P01824 125 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 HPXP02790 462 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 RPSAP08865 295 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 PAX1P15863 534 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 GNALP38405 381 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 CCL8P80075 99 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 TNFAIP6P98066 277 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 HNRNPA0Q13151 305 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 MAB21L1Q13394 359 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 DEFB113Q30KQ7 82 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 SYT6Q5T7P8 510 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 ASPHD2Q6ICH7 369 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 MOB3CQ70IA8 216 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 ITLN1Q8WWA0 313 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 NINJ1Q92982 152 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 PERPQ96FX8 193 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 SLC22A4Q9H015 551 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 BEX4Q9NWD9 120 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 EDARQ9UNE0 448 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 MPC1Q9Y5U8 109 aa16.98■□□□□ 0.31
SHKBP1-222ENST00000600320 MAGEA13PA6NCF6 341 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 GMDSO60547 372 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 NRASP01111 189 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 PCGF3Q3KNV8 242 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms