RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 FAM166AQ6J272 317 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 KLBQ86Z14 1044 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ELMOD2Q8IZ81 293 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 SPERTQ8NA61 448 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 NRG4Q8WWG1 115 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 PIGCQ92535 297 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 RORBQ92753 470 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
LIG1-219ENST00000600055 FGF23Q9GZV9 251 aaPredicted RBP12.79□□□□□ -0.36
LIG1-219ENST00000600055 MOB1AQ9H8S9 216 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ACOXLQ9NUZ1 547 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ZNF391Q9UJN7 358 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 SNX5Q9Y5X3 404 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ABCA1O95477 2261 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 DYSFO75923 2080 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 A0A1B0GTI1 187 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 H3BSH0 61 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 IFNL4K9M1U5 179 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 LMX1BO60663 402 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ATP6V1G2O95670 118 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 CST4P01036 141 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 MAP2K3P46734 347 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 OR12D2P58182 307 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ISL1P61371 349 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ACTC1P68032 377 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ACTA1P68133 377 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ZNF181Q2M3W8 571 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 CDONQ4KMG0 1287 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 DMRTC1Q5HYR2 192 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 LRRC28Q86X40 367 aaPredicted RBP12.78□□□□□ -0.36
LIG1-219ENST00000600055 PRSS35Q8N3Z0 413 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ACBD7Q8N6N7 88 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 Q8TCH9 128 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ITPKCQ96DU7 683 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 ADI1Q9BV57 179 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 FN3KRPQ9HA64 309 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 C1orf123Q9NWV4 160 aa12.78□□□□□ -0.36
LIG1-219ENST00000600055 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
LIG1-219ENST00000600055 ANK3Q12955 4377 aaKnown RBP12.78□□□□□ -0.36
LIG1-219ENST00000600055 ZNF816-ZNF321PA0A0X1KG74 233 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 A6NLC8 198 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 LRRC30A6NM36 301 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 GNAO1P09471 354 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 FAHP16930 419 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 THBS2P35442 1172 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 CAPGP40121 348 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 RIPPLY3P57055 190 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 CSNK2BP67870 215 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 WDR38Q5JTN6 314 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 FAM220AQ7Z4H9 259 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 C11orf53Q8IXP5 236 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 BOLLQ8N9W6 283 aaKnown RBP12.77□□□□□ -0.37
LIG1-219ENST00000600055 SEMA6DQ8NFY4 1073 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 OR1M1Q8NGA1 313 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 OR52I1Q8NGK6 324 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 HPSE2Q8WWQ2 592 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 ERGIC1Q969X5 290 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 METTL17Q9H7H0 456 aaPredicted RBP12.77□□□□□ -0.37
LIG1-219ENST00000600055 TMEM165Q9HC07 324 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 C14orf119Q9NWQ9 140 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 KCNS2Q9ULS6 477 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 PIGLQ9Y2B2 252 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 MPC1Q9Y5U8 109 aa12.77□□□□□ -0.37
LIG1-219ENST00000600055 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.37
LIG1-219ENST00000600055 PPIAL4EA0A075B759 164 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 A6NIN4 97 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ANXA2P2A6NMY6 339 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 B4DSR2 109 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 PPIAL4DF5H284 164 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 J3QLW9 94 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 CRLF1O75462 422 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 DHRS3O75911 302 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 IGHA1P01876 353 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 PPIAL4FP0DN26 164 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 IRF2P14316 349 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ZNF19P17023 458 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
LIG1-219ENST00000600055 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 MZT1Q08AG7 82 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 RIPPLY1Q0D2K3 151 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 RAB40BQ12829 278 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ZNF154Q13106 437 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 GALEQ14376 348 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 SNCBQ16143 134 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 CEP78Q5JTW2 689 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 IL17RELQ6ZVW7 336 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 THAP5Q7Z6K1 395 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 ZDHHC23Q8IYP9 409 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 RDH10Q8IZV5 341 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 C1orf87Q8N0U7 546 aa12.76□□□□□ -0.37
LIG1-219ENST00000600055 FTMTQ8N4E7 242 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms