RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CFPP27918 469 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 THBS2P35442 1172 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 GNALP38405 381 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 WNT5AP41221 380 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 MAP2K3P46734 347 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 PPP3R1P63098 170 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 FAM3AP98173 230 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 ZNF92Q03936 586 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 TLE4Q04727 773 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 RIPPLY1Q0D2K3 151 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 MALLQ13021 153 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 SLC25A35Q3KQZ1 300 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 IDNKQ5T6J7 187 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 ZBTB37Q5TC79 503 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 GLT8D1Q68CQ7 371 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 OR1M1Q8NGA1 313 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 OR2AE1Q8NHA4 323 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 S100ZQ8WXG8 99 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 PP6455Q8WZ26 134 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 FOXRED1Q96CU9 486 aaPredicted RBP11.62□□□□□ -0.55
VMP1-217ENST00000593168 MUCL1Q96DR8 90 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 MRI1Q9BV20 369 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 REPIN1Q9BWE0 567 aaKnown RBP11.62□□□□□ -0.55
VMP1-217ENST00000593168 PLEKHA1Q9HB21 404 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 CDH20Q9HBT6 801 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 TMEM138Q9NPI0 162 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 EIF3KQ9UBQ5 218 aaKnown RBP11.62□□□□□ -0.55
VMP1-217ENST00000593168 DAPK2Q9UIK4 370 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 DNHD1Q96M86 4753 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 NGFP01138 241 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 ALDOBP05062 364 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
VMP1-217ENST00000593168 ATF1P18846 271 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 RAB3AP20336 220 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 TUBG1P23258 451 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 BDKRB2P30411 391 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 CHRNB4P30926 498 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 GSK3AP49840 483 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 OR8B8Q15620 311 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 DDI2Q5TDH0 399 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 UTS2BQ765I0 119 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 CDH26Q8IXH8 852 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 PAQR4Q8N4S7 273 aaPredicted RBP11.61□□□□□ -0.55
VMP1-217ENST00000593168 WDFY2Q96P53 400 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 SPOCK3Q9BQ16 436 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 ACTR6Q9GZN1 396 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 TUBG2Q9NRH3 451 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 PIGLQ9Y2B2 252 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 STARD10Q9Y365 291 aa11.61□□□□□ -0.55
VMP1-217ENST00000593168 A6NIN4 97 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 CLDN25C9JDP6 229 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 CECR9P0C854 216 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 SLC2A2P11168 524 aaPredicted RBP11.6□□□□□ -0.55
VMP1-217ENST00000593168 ZNF35P13682 527 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 ETV6P41212 452 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 ASCL1P50553 236 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 TNK1Q13470 666 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 GK2Q14410 553 aaPredicted RBP11.6□□□□□ -0.55
VMP1-217ENST00000593168 PPA1Q15181 289 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 TAB1Q15750 504 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 UNQ6126/PRO20091Q6UXV3 157 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 KRT74Q7RTS7 529 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 MYPOPQ86VE0 399 aaPredicted RBP11.6□□□□□ -0.55
VMP1-217ENST00000593168 LYPD6Q86Y78 171 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 C1orf174Q8IYL3 243 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 ZNF101Q8IZC7 436 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 ACBD4Q8NC06 268 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 DNAAF1Q8NEP3 725 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 OR51A2Q8NGJ7 313 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 CMTM3Q96MX0 182 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 C1QTNF6Q9BXI9 259 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 CHST5Q9GZS9 411 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 ABCB9Q9NP78 766 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 AKIP1Q9NQ31 210 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 COQ3Q9NZJ6 369 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 COMMD3Q9UBI1 195 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 CMAHPQ9Y471 501 aa11.6□□□□□ -0.55
VMP1-217ENST00000593168 IGHV1-18A0A0C4DH31 117 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 SLC17A2O00624 439 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 RGS5O15539 181 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 SULT1B1O43704 296 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 SMPD2O60906 423 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 CALCBP10092 127 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 PPP3CBP16298 524 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 FAHP16930 419 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 ACKR3P25106 362 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 CCKARP32238 428 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 TNFSF8P32971 234 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 RAD52P43351 418 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 RANBP1P43487 201 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 UCP2P55851 309 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 SCAND1P57086 179 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 SPOCK1Q08629 439 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 C1orf100Q5SVJ3 147 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 TMEM42Q69YG0 159 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 FAM166AQ6J272 317 aa11.59□□□□□ -0.55
VMP1-217ENST00000593168 RFPL4BQ6ZWI9 263 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms