RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 LRRC28Q86X40 367 aaPredicted RBP10.92□□□□□ -0.66
VMP1-202ENST00000585847 CSNK2A3Q8NEV1 391 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 SLC30A7Q8NEW0 376 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 OR51E1Q8TCB6 317 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 BORCS5Q969J3 196 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 POM121L2Q96KW2 1035 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 TPK1Q9H3S4 243 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 HEATR1Q9H583 2144 aaKnown RBP10.92□□□□□ -0.66
VMP1-202ENST00000585847 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
VMP1-202ENST00000585847 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 TACC2O95359 2948 aa10.92□□□□□ -0.66
VMP1-202ENST00000585847 A0A1B0GTI1 187 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 FAM221AA4D161 298 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 DPRXA6NFQ7 191 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 P2RY10O00398 339 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 PIN1P1O15428 100 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 SULT1B1O43704 296 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 IGLV1-44P01699 117 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 CELA3BP08861 270 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 UBBP0CG47 229 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 SOX2P48431 317 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 MXD1Q05195 221 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 DCTN2Q13561 401 aaKnown RBP10.91□□□□□ -0.66
VMP1-202ENST00000585847 RIN1Q13671 783 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 PPA1Q15181 289 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 CNN3Q15417 329 aaKnown RBP10.91□□□□□ -0.66
VMP1-202ENST00000585847 MDP1Q86V88 176 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 WFDC8Q8IUA0 241 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 ZNF584Q8IVC4 421 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 ZNF295-AS1Q8N0V1 137 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 SEMA6DQ8NFY4 1073 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 OR13C5Q8NGS8 318 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 AKR7LQ8NHP1 331 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 PTX4Q96A99 478 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 MUCL1Q96DR8 90 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 C1QTNF6Q9BXI9 259 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 BARHL1Q9BZE3 327 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 CHST5Q9GZS9 411 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 RNF167Q9H6Y7 350 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 CDH20Q9HBT6 801 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 NDRG3Q9UGV2 375 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 NOP16Q9Y3C1 178 aaKnown RBP10.91□□□□□ -0.66
VMP1-202ENST00000585847 CMAHPQ9Y471 501 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 PMF1-BGLAPU3KQ54 211 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 F8P00451 2351 aa10.91□□□□□ -0.66
VMP1-202ENST00000585847 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 IGHV1-18A0A0C4DH31 117 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 A0A1W2PPR1 153 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 SLC17A2O00624 439 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 TBX1O43435 398 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 APOA1P02647 267 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 INHBBP09529 407 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 ZNF14P17017 642 aaPredicted RBP10.9□□□□□ -0.66
VMP1-202ENST00000585847 PRKACBP22694 351 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 BDKRB2P30411 391 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 PEX19P40855 299 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 NR4A2P43354 598 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 DAZAP2Q15038 168 aaPredicted RBP10.9□□□□□ -0.66
VMP1-202ENST00000585847 RSPO1Q2MKA7 263 aaPredicted RBP10.9□□□□□ -0.66
VMP1-202ENST00000585847 LRRTM1Q86UE6 522 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 PNLDC1Q8NA58 520 aaKnown RBP10.9□□□□□ -0.66
VMP1-202ENST00000585847 CPEB3Q8NE35 698 aaKnown RBP10.9□□□□□ -0.66
VMP1-202ENST00000585847 DNAAF1Q8NEP3 725 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 OR14K1Q8NGZ2 314 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 FAM222BQ8WU58 562 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 RAB40AQ8WXH6 277 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 PIGTQ969N2 578 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 SORCS2Q96PQ0 1159 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 SLC30A2Q9BRI3 323 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 CCDC32Q9BV29 185 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 BCL2L14Q9BZR8 327 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 METTL17Q9H7H0 456 aaPredicted RBP10.9□□□□□ -0.66
VMP1-202ENST00000585847 PLGRKTQ9HBL7 147 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 NGBQ9NPG2 151 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 AKIP1Q9NQ31 210 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 STEAP1Q9UHE8 339 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 SPATA2Q9UM82 520 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 SPEF1Q9Y4P9 236 aa10.9□□□□□ -0.66
VMP1-202ENST00000585847 A0A0A6YYH2 397 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 A0A0G2JK05 382 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 ZNF816-ZNF321PA0A0X1KG74 233 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 hCG_38984A0A1B0GV85 526 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 A6NJ64 397 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 RGS5O15539 181 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 OCMP0CE72 109 aaPredicted RBP10.89□□□□□ -0.67
VMP1-202ENST00000585847 SSTR2P30874 369 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 TGFBR1P36897 503 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 RAD52P43351 418 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 ZNF83P51522 516 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 BMXP51813 675 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 RPS23P62266 143 aaKnown RBP10.89□□□□□ -0.67
VMP1-202ENST00000585847 INSL4Q14641 139 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 RAB11BQ15907 218 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 CEP78Q5JTW2 689 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 C1orf100Q5SVJ3 147 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 NCMAPQ5T1S8 102 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 CCDC190Q86UF4 302 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 RDH10Q8IZV5 341 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms