RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 ANKRD30BLA7E2S9 258 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 ZNF850A8MQ14 1090 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 MLNRO43193 412 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 LY6HO94772 140 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 TNFAIP8O95379 198 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 HLA-DPB1P04440 258 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 PAX1P15863 534 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 FAHP16930 419 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 CELP19835 753 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 ACHEP22303 614 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 CA6P23280 308 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 TAS2R43P59537 309 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 BDH1Q02338 343 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 RIPPLY1Q0D2K3 151 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 TESK1Q15569 626 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 TBCEQ15813 527 aaPredicted RBP7.28□□□□□ -1.24
NUP88-211ENST00000575976 SPRNQ5BIV9 151 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 ZNF773Q6PK81 442 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 SVOPQ8N4V2 548 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 CCDC54Q8NEL0 328 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 CSNK2A3Q8NEV1 391 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 OR2Z1Q8NG97 314 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 OR10AD1Q8NGE0 317 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 OR51A4Q8NGJ6 313 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 OR13G1Q8NGZ3 307 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 NEU4Q8WWR8 484 aaPredicted RBP7.28□□□□□ -1.24
NUP88-211ENST00000575976 PIGCQ92535 297 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 RGP1Q92546 391 aaPredicted RBP7.28□□□□□ -1.24
NUP88-211ENST00000575976 DVL3Q92997 716 aaPredicted RBP7.28□□□□□ -1.24
NUP88-211ENST00000575976 ITFG2Q969R8 447 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 SMIM19Q96E16 107 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 ELMOD3Q96FG2 381 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 PERPQ96FX8 193 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 PGLYRP3Q96LB9 341 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 DIRC2Q96SL1 478 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 GSX2Q9BZM3 304 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 COMMD4Q9H0A8 199 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 RAB1BQ9H0U4 201 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 BEX4Q9NWD9 120 aaPredicted RBP7.28□□□□□ -1.24
NUP88-211ENST00000575976 NKIRAS2Q9NYR9 191 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 MRPL15Q9P015 296 aaKnown RBP7.28□□□□□ -1.24
NUP88-211ENST00000575976 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 HHLA2Q9UM44 414 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 PIGLQ9Y2B2 252 aa7.28□□□□□ -1.24
NUP88-211ENST00000575976 ZNF816-ZNF321PA0A0X1KG74 233 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 A0A1B0GWJ7 208 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 F5H5P2 479 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 PLPP2O43688 288 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 NCR1O76036 304 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 F12P00748 615 aaPredicted RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 CST4P01036 141 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 IGHV4-39P01824 125 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 HPXP02790 462 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 CD55P08174 381 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ADH4P08319 380 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 HSMCR30P0CW71 290 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ZNF12P17014 697 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 PCMT1P22061 227 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 SOX2P48431 317 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ATP5J2P56134 94 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 CCL8P80075 99 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 TNFAIP6P98066 277 aaPredicted RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 PRDX4Q13162 271 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 OR8G1Q15617 311 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 PCGF3Q3KNV8 242 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ZMAT1Q5H9K5 638 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 DMRTC1Q5HYR2 192 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 FAM209AQ5JX71 171 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 MOB3CQ70IA8 216 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 KRT74Q7RTS7 529 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ZNF367Q7RTV3 350 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 LRRC75A-AS1Q8N1F1 130 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 OR13C5Q8NGS8 318 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 GHSRQ92847 366 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 FGGYQ96C11 551 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ADAT3Q96EY9 351 aaPredicted RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 OPALINQ96PE5 141 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 NR1H4Q96RI1 486 aaPredicted RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 MGLLQ99685 303 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ADAT1Q9BUB4 502 aaKnown RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 PAPOLGQ9BWT3 736 aaKnown RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 SLC22A4Q9H015 551 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ZNF696Q9H7X3 374 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ISYNA1Q9NPH2 558 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ENPP5Q9UJA9 477 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ZNF281Q9Y2X9 895 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
NUP88-211ENST00000575976 PLCE1Q9P212 2302 aa7.27□□□□□ -1.25
NUP88-211ENST00000575976 ARFGEF3Q5TH69 2177 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 DCHS2Q6V1P9 2916 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 IGHV3-64DA0A0J9YX35 117 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 DHRS7CA6NNS2 312 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 LYNX1G3V0Z9 82 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 TPD52L2O43399 206 aaKnown RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 SSX4O60224 188 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 GMDSO60547 372 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 CD1AP06126 327 aa7.26□□□□□ -1.25
NUP88-211ENST00000575976 ERCC1P07992 297 aaPredicted RBP7.26□□□□□ -1.25
NUP88-211ENST00000575976 LYNX1P0DP58 116 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms