RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 UTP23Q9BRU9 249 aaKnown RBP14.34□□□□□ -0.11
RAB40B-206ENST00000571995 CACNA1AO00555 2505 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 MPC2O95563 127 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 SULT1A3P0DMM9 295 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 SULT1A4P0DMN0 295 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 HACD4Q5VWC8 232 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 TMEM105Q8N8V8 129 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 SGCZQ96LD1 299 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 ZNF75AQ96N20 296 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 RAB22AQ9UL26 194 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 NCOA6Q14686 2063 aaPredicted RBP14.34□□□□□ -0.11
RAB40B-206ENST00000571995 TLN1Q9Y490 2541 aaKnown RBP14.34□□□□□ -0.11
RAB40B-206ENST00000571995 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 hCG_1807616A0A1W2PRN6 198 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 OR5H14A6NHG9 310 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 IGLV3-19P01714 112 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 RFPL3SP0C7P2 107 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 VSIG8P0DPA2 414 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 EPHA1P21709 976 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 H2BFSP57053 126 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 ESCO2Q56NI9 601 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 UNQ9370/PRO34162Q6UXP9 181 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 ZNF519Q8TB69 540 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 THRSPQ92748 146 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 ZCCHC4Q9H5U6 513 aa14.34□□□□□ -0.11
RAB40B-206ENST00000571995 C5orf49A4QMS7 147 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 C3orf80F5H4A9 247 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 TPD52L2O43399 206 aaKnown RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 MTRF1O75570 445 aaKnown RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 CXCL2P19875 107 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 MRPL21Q7Z2W9 205 aaKnown RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 PDZD9Q8IXQ8 264 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 ADAD2Q8NCV1 583 aaKnown RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 OR2M3Q8NG83 312 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 CMSS1Q9BQ75 279 aaKnown RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 KLK13Q9UKR3 277 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 CHD8Q9HCK8 2581 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 RGS13O14921 159 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 FAM157BP0CG42 384 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 RRASP10301 218 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF32P17041 273 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 ATP1B3P54709 279 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 AIMP2Q13155 320 aaKnown RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 ARHGEF39Q8N4T4 335 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 PLPPR2Q96GM1 343 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 MBD2Q9UBB5 411 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 OTOGLQ3ZCN5 2332 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 KIAA1549LQ6ZVL6 1849 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 C7orf66A4D0T2 115 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 WRBO00258 174 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 ITGB2P05107 769 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 MGMTP16455 207 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 SERPINF1P36955 418 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 GK2Q14410 553 aaPredicted RBP14.33□□□□□ -0.12
RAB40B-206ENST00000571995 OR5M9Q8NGP3 310 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 OR10D3Q8NH80 312 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 GPHA2Q96T91 129 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 PRRT1Q99946 306 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 MRI1Q9BV20 369 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 B4GALT7Q9UBV7 327 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 OR14J1Q9UGF5 321 aa14.33□□□□□ -0.12
RAB40B-206ENST00000571995 FRYQ5TBA9 3013 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 A0A1B0GW55 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4L2P0CJ85 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4L3P0CJ86 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4L4P0CJ87 422 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4L5P0CJ88 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4L6P0CJ89 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4L7P0CJ90 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 NR2C1P13056 603 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 MSX1P28360 303 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 HERV-K104P61576 105 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF585AQ6P3V2 769 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 VHLLQ6RSH7 139 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 TWSG1Q9GZX9 223 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 DUX4Q9UBX2 424 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 CCDC187A0A096LP49 1063 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 TRBV5-5A0A0J9YX44 114 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 TPOP07202 933 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 GNRHRP30968 328 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 ASCL1P50553 236 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 P2RX3P56373 397 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 TSPO2Q5TGU0 170 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 PRSS42Q7Z5A4 293 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 KCNG3Q8TAE7 436 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 PILRBQ9UKJ0 227 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 LHFPL6Q9Y693 200 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 HS3ST1O14792 307 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 NAGAP17050 411 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 GLRA1P23415 457 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 KISS1Q15726 138 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 WDSUB1Q8N9V3 476 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 LIPHQ8WWY8 451 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 RDH5Q92781 318 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 FAAP24Q9BTP7 215 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 PPA2Q9H2U2 334 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 HRH4Q9H3N8 390 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 PRMT8Q9NR22 394 aaPredicted RBP14.32□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF319Q9P2F9 582 aa14.32□□□□□ -0.12
RAB40B-206ENST00000571995 TCFL5Q9UL49 500 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms