RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FGGYQ96C11 551 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 ADAT3Q96EY9 351 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-205ENST00000564899 SLITRK2Q9H156 845 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 LIME1Q9H400 295 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 POFUT1Q9H488 388 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 OPA3Q9H6K4 179 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 TCF7L1Q9HCS4 588 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 CKLFQ9UBR5 152 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 SPEF1Q9Y4P9 236 aa9.54□□□□□ -0.88
SF3B3-205ENST00000564899 FBN1P35555 2871 aaKnown RBP9.54□□□□□ -0.88
SF3B3-205ENST00000564899 TRAV1-2A0A0B4J238 106 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SHISA3A0PJX4 238 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 TUBAL3A6NHL2 446 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 TRIM64BA6NI03 449 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 A6NIN4 97 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 DHRS7CA6NNS2 312 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 ATP6V1G2-DDX39BF2Z307 99 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 CLEC2LP0C7M8 214 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 EPXP11678 715 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 FAHP16930 419 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SRMP19623 302 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 FSTP19883 344 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SDC2P34741 201 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 THBS4P35443 961 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 GNALP38405 381 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 MAP2K3P46734 347 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 GSK3AP49840 483 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 ERVS71-1P61550 626 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 PPP3R1P63098 170 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SPOCK1Q08629 439 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 RIPPLY1Q0D2K3 151 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 Q71RC1 249 aaPredicted RBP9.53□□□□□ -0.88
SF3B3-205ENST00000564899 PARP16Q8N5Y8 322 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 OR56B2PQ8NGI1 322 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SLC25A40Q8TBP6 338 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SMR3AQ99954 134 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 REPIN1Q9BWE0 567 aaKnown RBP9.53□□□□□ -0.88
SF3B3-205ENST00000564899 BCL2L14Q9BZR8 327 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 OR2J1Q9GZK6 312 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 SNTG1Q9NSN8 517 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 TAS2R4Q9NYW5 299 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 PIGLQ9Y2B2 252 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 ZANQ9Y493 2812 aa9.53□□□□□ -0.88
SF3B3-205ENST00000564899 COL6A5A8TX70 2615 aa9.52□□□□□ -0.88
SF3B3-205ENST00000564899 TRAV8-7A0A075B6U6 113 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 SMIM30A4D0T7 59 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 DPRXA6NFQ7 191 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 ANKRD61A6NGH8 418 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 GGT3PA6NGU5 568 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 PDCD5O14737 125 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 IL1AP01583 271 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 ZNF182P17025 639 aaPredicted RBP9.52□□□□□ -0.89
SF3B3-205ENST00000564899 ACKR3P25106 362 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 RPS19P39019 145 aaKnown RBP9.52□□□□□ -0.89
SF3B3-205ENST00000564899 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 SNTB2Q13425 540 aaKnown RBP9.52□□□□□ -0.89
SF3B3-205ENST00000564899 OR8B8Q15620 311 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 ASPHD2Q6ICH7 369 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 FBXW12Q6X9E4 464 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 TPRA1Q86W33 373 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 TGIF2LYQ8IUE0 185 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 SERPINA12Q8IW75 414 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 C1orf174Q8IYL3 243 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 PIAS4Q8N2W9 510 aaPredicted RBP9.52□□□□□ -0.89
SF3B3-205ENST00000564899 OR5D14Q8NGL3 314 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 DYNC2LI1Q8TCX1 351 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 C10orf35Q96D05 121 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 RADILQ96JH8 1075 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 ESRP2Q9H6T0 727 aaKnown RBP9.52□□□□□ -0.89
SF3B3-205ENST00000564899 DLL4Q9NR61 685 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 FOXJ3Q9UPW0 622 aa9.52□□□□□ -0.89
SF3B3-205ENST00000564899 CSPG4Q6UVK1 2322 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 RTTNQ86VV8 2226 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 ZNF816-ZNF321PA0A0X1KG74 233 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 CD300LBA8K4G0 201 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 ABCD4O14678 606 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 NCR1O76036 304 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 MAS1P04201 325 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 RAC2P15153 192 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 IGFBP3P17936 291 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-205ENST00000564899 RAB3AP20336 220 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 RAB3BP20337 219 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 TUBG1P23258 451 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 GCH1P30793 250 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 DDOSTP39656 456 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 PEX19P40855 299 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 RPS23P62266 143 aaKnown RBP9.51□□□□□ -0.89
SF3B3-205ENST00000564899 NKX6-1P78426 367 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-205ENST00000564899 HNRNPA0Q13151 305 aaKnown RBP9.51□□□□□ -0.89
SF3B3-205ENST00000564899 TNK1Q13470 666 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 CEP78Q5JTW2 689 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 NCMAPQ5T1S8 102 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 ZBTB37Q5TC79 503 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 OR2T2Q6IF00 324 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-205ENST00000564899 LRRTM1Q86UE6 522 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 CSNK2A3Q8NEV1 391 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 NUP37Q8NFH4 326 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 OR1M1Q8NGA1 313 aa9.51□□□□□ -0.89
SF3B3-205ENST00000564899 OR13C9Q8NGT0 318 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms