RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 CENPEQ02224 2701 aa8.22□□□□□ -1.09
CUX1-216ENST00000558469 TRBV5-5A0A0J9YX44 114 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ZNF816-ZNF321PA0A0X1KG74 233 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ANKRD61A6NGH8 418 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 DHRS7CA6NNS2 312 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ANKRD30BLA7E2S9 258 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 B9A039 149 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 GABRPO00591 440 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 HLA-DPB1P04440 258 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 CD2P06729 351 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 CA6P23280 308 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 CRYBB2P43320 205 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ALDH3B1P43353 468 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 EVX1P49640 407 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 MOGQ16653 247 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 NKPD1Q17RQ9 610 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 MST1LQ2TV78 715 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ZMAT1Q5H9K5 638 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 DMRTC1Q5HYR2 192 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ZBTB37Q5TC79 503 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 UNQ9370/PRO34162Q6UXP9 181 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 TMEM91Q6ZNR0 172 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 SATL1Q86VE3 508 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 FTMTQ8N4E7 242 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 OR8G5Q8NG78 346 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 GTF3AQ92664 365 aaKnown RBP8.21□□□□□ -1.1
CUX1-216ENST00000558469 ORAI1Q96D31 301 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ADAT3Q96EY9 351 aaPredicted RBP8.21□□□□□ -1.1
CUX1-216ENST00000558469 C14orf79Q96F83 325 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 DERL3Q96Q80 235 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 FUNDC2Q9BWH2 189 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 PAPOLGQ9BWT3 736 aaKnown RBP8.21□□□□□ -1.1
CUX1-216ENST00000558469 OR51E2Q9H255 320 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 PPP1R3EQ9H7J1 279 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 MSL2Q9HCI7 577 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 EXOSC4Q9NPD3 245 aaKnown RBP8.21□□□□□ -1.1
CUX1-216ENST00000558469 GPR160Q9UJ42 338 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 ENPP5Q9UJA9 477 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 STUB1Q9UNE7 303 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 RHBDD3Q9Y3P4 386 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 CACNA1DQ01668 2161 aa8.21□□□□□ -1.1
CUX1-216ENST00000558469 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 LOC100506127A0A0U1RQW1 187 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 TRDV1A0A1B0GX56 115 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 PLSCR5A0PG75 271 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 ZNF850A8MQ14 1090 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 H0YL77 283 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 AIREO43918 545 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 GMDSO60547 372 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 GPX5O75715 221 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 SC5DO75845 299 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 GATBO75879 557 aaKnown RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 CST4P01036 141 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 NRASP01111 189 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 SOD3P08294 240 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 DANCRP0C864 163 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 NAT2P11245 290 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 MAPK3P27361 379 aaPredicted RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 MMP15P51511 669 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 PRDX4Q13162 271 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 BLMHQ13867 455 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 EFNB3Q15768 340 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 SWI5Q1ZZU3 235 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 CEP78Q5JTW2 689 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 CLVS2Q5SYC1 327 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 FAM27D1Q5T7N8 215 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 AGAP6Q5VW22 663 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 GPR107Q5VW38 600 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 ZNF787Q6DD87 383 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 CD200R1LQ6Q8B3 271 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 Q6ZR03 302 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 MOB3CQ70IA8 216 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 SERPINA12Q8IW75 414 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 PARP16Q8N5Y8 322 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 ZNF611Q8N823 705 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 OR5D14Q8NGL3 314 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 OR13G1Q8NGZ3 307 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 THRSPQ92748 146 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 RPL3LQ92901 407 aaKnown RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 ITFG2Q969R8 447 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 C10orf35Q96D05 121 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 TRMT61AQ96FX7 289 aaKnown RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 SLC30A2Q9BRI3 323 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 CHCHD6Q9BRQ6 235 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 PPIL3Q9H2H8 161 aaKnown RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 PLEKHF2Q9H8W4 249 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 NOX4Q9NPH5 578 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 GPR173Q9NS66 373 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 CBLN4Q9NTU7 201 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 TMEM100Q9NV29 134 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 TXNL4BQ9NX01 149 aaKnown RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 MRPL15Q9P015 296 aaKnown RBP8.2□□□□□ -1.1
CUX1-216ENST00000558469 SSR3Q9UNL2 185 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 DYSFO75923 2080 aa8.2□□□□□ -1.1
CUX1-216ENST00000558469 TACC2O95359 2948 aa8.19□□□□□ -1.1
CUX1-216ENST00000558469 TRBV5-7A0A0A0MS05 114 aa8.19□□□□□ -1.1
CUX1-216ENST00000558469 ZSCAN5BA6NJL1 495 aa8.19□□□□□ -1.1
CUX1-216ENST00000558469 M0R233 179 aa8.19□□□□□ -1.1
CUX1-216ENST00000558469 PIN1P1O15428 100 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms