RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TENM4Q6N022 2769 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 ANKRD61A6NGH8 418 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 SULT1B1O43704 296 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
TPM1-209ENST00000558072 GMDSO60547 372 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 NRASP01111 189 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 IGHV3-13P01766 116 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 ANOS1P23352 680 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 BDKRB2P30411 391 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
TPM1-209ENST00000558072 SERPINB10P48595 397 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 SPOCK1Q08629 439 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 FAM209AQ5JX71 171 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 SLC16A12Q6ZSM3 486 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 ACBD4Q8NC06 268 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 DNAAF1Q8NEP3 725 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 OR13G1Q8NGZ3 307 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 RGP1Q92546 391 aaPredicted RBP10.66□□□□□ -0.7
TPM1-209ENST00000558072 AP3S1Q92572 193 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 C12orf43Q96C57 262 aaKnown RBP10.66□□□□□ -0.7
TPM1-209ENST00000558072 PIK3IP1Q96FE7 263 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 TMEM204Q9BSN7 226 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 OR51B6Q9H340 312 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 PCDHB16Q9NRJ7 776 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 TMEM100Q9NV29 134 aa10.66□□□□□ -0.7
TPM1-209ENST00000558072 PURGQ9UJV8 347 aaKnown RBP10.66□□□□□ -0.7
TPM1-209ENST00000558072 SPTBN1Q01082 2364 aaKnown RBP10.66□□□□□ -0.7
TPM1-209ENST00000558072 RTTNQ86VV8 2226 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 PRR14LQ5THK1 2151 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 IGLV3-9A0A075B6K5 115 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 H3BMQ9 156 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 SIAH2O43255 324 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 RAB3BP20337 219 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 TNFSF4P23510 183 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 FABP6P51161 128 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 RORCP51449 518 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 FUT6P51993 359 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 VBP1P61758 197 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 TMEM42Q69YG0 159 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 LHFPL2Q6ZUX7 228 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 ZDHHC23Q8IYP9 409 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 PNLDC1Q8NA58 520 aaKnown RBP10.65□□□□□ -0.7
TPM1-209ENST00000558072 OR8G5Q8NG78 346 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 OR1M1Q8NGA1 313 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 OR56B2PQ8NGI1 322 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 OR5A2Q8NGI9 324 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 OR51A4Q8NGJ6 313 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 TMEM171Q8WVE6 324 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 MRPL24Q96A35 216 aaKnown RBP10.65□□□□□ -0.7
TPM1-209ENST00000558072 DHRS9Q9BPW9 319 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 MICU1Q9BPX6 476 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 UQCC2Q9BRT2 126 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 PAPOLGQ9BWT3 736 aaKnown RBP10.65□□□□□ -0.7
TPM1-209ENST00000558072 DCSTAMPQ9H295 470 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 PLK3Q9H4B4 646 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 C14orf119Q9NWQ9 140 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 DUSP13Q9UII6 198 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 ZDHHC8Q9ULC8 765 aa10.65□□□□□ -0.7
TPM1-209ENST00000558072 ANKHD1Q8IWZ3 2542 aaKnown RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 A0A1W2PPW3 197 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 OR5B21A6NL26 309 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 SHISA9B4DS77 424 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 B9A039 149 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 CDRT1O95170 752 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 COX6B1P14854 86 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 FAHP16930 419 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 IGFBP3P17936 291 aaPredicted RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 ATF1P18846 271 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 SERPINF1P36955 418 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 ATP1B3P54709 279 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 LSM3P62310 102 aaKnown RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 PSG7Q13046 419 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 DYNC1I2Q13409 638 aaKnown RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 HLXQ14774 488 aaPredicted RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 EFNB3Q15768 340 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 FAM189A2Q15884 450 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 DGUOKQ16854 277 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 ZNF672Q499Z4 452 aaPredicted RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 OR2T2Q6IF00 324 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 ZNF529Q6P280 563 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 FBXL14Q8N1E6 418 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 OR13C5Q8NGS8 318 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 OR10AC1Q8NH08 325 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 OR8S1Q8NH09 359 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 ACOT12Q8WYK0 555 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 PIGCQ92535 297 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 RPL3LQ92901 407 aaKnown RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 ADAT3Q96EY9 351 aaPredicted RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 RTL8AQ9BWD3 113 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 MS4A5Q9H3V2 200 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 CISD1Q9NZ45 108 aaKnown RBP10.64□□□□□ -0.71
TPM1-209ENST00000558072 V9GY05 133 aa10.64□□□□□ -0.71
TPM1-209ENST00000558072 TMEM210A6NLX4 147 aa10.63□□□□□ -0.71
TPM1-209ENST00000558072 A6NNC1 897 aa10.63□□□□□ -0.71
TPM1-209ENST00000558072 NOTOA8MTQ0 251 aa10.63□□□□□ -0.71
TPM1-209ENST00000558072 DEFB108AA8MXU0 73 aa10.63□□□□□ -0.71
TPM1-209ENST00000558072 CYB5AP00167 134 aa10.63□□□□□ -0.71
TPM1-209ENST00000558072 HCKP08631 526 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms