RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 LIPKQ5VXJ0 399 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 KCTD8Q6ZWB6 473 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 KRT74Q7RTS7 529 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 ZNF367Q7RTV3 350 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 CDH24Q86UP0 819 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 SVOPQ8N4V2 548 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 CSNK2A3Q8NEV1 391 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 PIGCQ92535 297 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 FGGYQ96C11 551 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 ADAT3Q96EY9 351 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-227ENST00000557269 COMMD4Q9H0A8 199 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 MS4A5Q9H3V2 200 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 CXorf56Q9H5V9 222 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 CYSLTR2Q9NS75 346 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 HHLA2Q9UM44 414 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 ZNF281Q9Y2X9 895 aa10.89□□□□□ -0.67
SHMT2-227ENST00000557269 SPG11Q96JI7 2443 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 CSMD2Q7Z408 3487 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ZNF816-ZNF321PA0A0X1KG74 233 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 TRIM64CA6NLI5 447 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ANKRD30BLA7E2S9 258 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 FLNBO75369 2602 aaKnown RBP10.88□□□□□ -0.67
SHMT2-227ENST00000557269 MTRF1O75570 445 aaKnown RBP10.88□□□□□ -0.67
SHMT2-227ENST00000557269 IGHV4-39P01824 125 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 HPXP02790 462 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ADH4P08319 380 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 BMP4P12644 408 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ATP6V1B1P15313 513 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 PAX1P15863 534 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 CPEP16870 476 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 SOX2P48431 317 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 PTH2RP49190 550 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 RPS25P62851 125 aaKnown RBP10.88□□□□□ -0.67
SHMT2-227ENST00000557269 PRDX4Q13162 271 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 TPBGQ13641 420 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 NEDD8Q15843 81 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 SSX1Q16384 188 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 DEFB113Q30KQ7 82 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ARMCX4Q5H9R4 360 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 TMEM42Q69YG0 159 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ASPHD2Q6ICH7 369 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 WDR86Q86TI4 376 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 TGIF2LYQ8IUE0 185 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 PHC2Q8IXK0 858 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 OR13C3Q8NGS6 347 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 UBASH3BQ8TF42 649 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 HPSE2Q8WWQ2 592 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ORAI1Q96D31 301 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ELMOD3Q96FG2 381 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 PERPQ96FX8 193 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 PAPOLGQ9BWT3 736 aaKnown RBP10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ISYNA1Q9NPH2 558 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 GPR173Q9NS66 373 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ZNF275Q9NSD4 429 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-227ENST00000557269 CGGBP1Q9UFW8 167 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ZDHHC8Q9ULC8 765 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 ITPR2Q14571 2701 aa10.88□□□□□ -0.67
SHMT2-227ENST00000557269 A0A087WXM4 84 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 TRBV5-5A0A0J9YX44 114 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 LOC100289279A0A1B0GTE1 492 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 ANKRD61A6NGH8 418 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 LYNX1G3V0Z9 82 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 GMDSO60547 372 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 CD1AP06126 327 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 CD55P08174 381 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 LYNX1P0DP58 116 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 THBS2P35442 1172 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 GP2P55259 537 aaKnown RBP10.87□□□□□ -0.67
SHMT2-227ENST00000557269 TNFAIP6P98066 277 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-227ENST00000557269 OR8G1Q15617 311 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 UBE2V2Q15819 145 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 CEP78Q5JTW2 689 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 ZBTB37Q5TC79 503 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 MOB3CQ70IA8 216 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 GPR148Q8TDV2 347 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 OR5P3Q8WZ94 311 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 UFD1Q92890 307 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 NINJ1Q92982 152 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 MBD6Q96DN6 1003 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 ITPKCQ96DU7 683 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 OR2V2Q96R30 315 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 ADAT1Q9BUB4 502 aaKnown RBP10.87□□□□□ -0.67
SHMT2-227ENST00000557269 TMED9Q9BVK6 235 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 GSX2Q9BZM3 304 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 RAB1BQ9H0U4 201 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-227ENST00000557269 NKIRAS2Q9NYR9 191 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 TREM2Q9NZC2 230 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 ENPP5Q9UJA9 477 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 DHDHQ9UQ10 334 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 SF3B6Q9Y3B4 125 aaKnown RBP10.87□□□□□ -0.67
SHMT2-227ENST00000557269 CACNG2Q9Y698 323 aa10.87□□□□□ -0.67
SHMT2-227ENST00000557269 USF3Q68DE3 2245 aa10.86□□□□□ -0.67
SHMT2-227ENST00000557269 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
SHMT2-227ENST00000557269 A0A1W2PPK0 400 aa10.86□□□□□ -0.67
SHMT2-227ENST00000557269 DHRS7CA6NNS2 312 aa10.86□□□□□ -0.67
SHMT2-227ENST00000557269 F12P00748 615 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms