RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 KLF14Q8TD94 323 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 MARS2Q96GW9 593 aaKnown RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 SOX7Q9BT81 388 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 CACNG6Q9BXT2 260 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 PBOV1Q9GZY1 135 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 OR10A2Q9H208 303 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 RGCCQ9H4X1 137 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 MOB1AQ9H8S9 216 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 BARX1Q9HBU1 254 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 CYSLTR2Q9NS75 346 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 FZR1Q9UM11 496 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 N6AMT1Q9Y5N5 214 aa9.35□□□□□ -0.91
SHMT2-218ENST00000555213 ANKRD17O75179 2603 aaKnown RBP9.35□□□□□ -0.91
SHMT2-218ENST00000555213 POLQO75417 2590 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 IGLV3-9A0A075B6K5 115 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 A0A0G2JK05 382 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 ANKRD61A6NGH8 418 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 TMEM212A6NML5 194 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF879B4DU55 563 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 H7C417 338 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 TBX1O43435 398 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 XRCC2O43543 280 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 LMX1BO60663 402 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 GATBO75879 557 aaKnown RBP9.34□□□□□ -0.91
SHMT2-218ENST00000555213 CDRT1O95170 752 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 IL1AP01583 271 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 CD37P11049 281 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 SLC2A1P11166 492 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 RAC2P15153 192 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 C11orf71Q6IPW1 123 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 FBXW12Q6X9E4 464 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 Q6ZSR3 168 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 FAM57BQ71RH2 274 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 TBC1D15Q8TC07 691 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 PGAM5Q96HS1 289 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 LYZL4Q96KX0 146 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 KCTD7Q96MP8 289 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 DERL3Q96Q80 235 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 OR14A2Q96R54 314 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 GFI1Q99684 422 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 SLC30A2Q9BRI3 323 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 GSX2Q9BZM3 304 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 MS4A5Q9H3V2 200 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 PTTG3PQ9NZH4 202 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 TAAR3PQ9P1P4 343 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 NUFIP1Q9UHK0 495 aaKnown RBP9.34□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF391Q9UJN7 358 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 GTF2A1LQ9UNN4 478 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 STARD10Q9Y365 291 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 AKAP6Q13023 2319 aa9.34□□□□□ -0.91
SHMT2-218ENST00000555213 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-218ENST00000555213 HEATR1Q9H583 2144 aaKnown RBP9.34□□□□□ -0.91
SHMT2-218ENST00000555213 TRAV1-2A0A0B4J238 106 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 ACOD1A6NK06 481 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 LOC110117498-PIK3R3F6TDL0 507 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 OVOL3O00110 214 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 NOL3O60936 208 aaKnown RBP9.33□□□□□ -0.92
SHMT2-218ENST00000555213 CD8AP01732 235 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 INHBBP09529 407 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 CDKN1AP38936 164 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 MPV17P39210 176 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 PTH2RP49190 550 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 ATP5J2P56134 94 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 CAV3P56539 151 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 ODF4Q2M2E3 257 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 MST1LQ2TV78 715 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 GFOD2Q3B7J2 385 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 BCL2L15Q5TBC7 163 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 PGAP1Q75T13 922 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 LRRC75A-AS1Q8N1F1 130 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 PLPP7Q8NBV4 271 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 IGFBPL1Q8WX77 278 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 PHYHIPQ92561 330 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 SGK3Q96BR1 496 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 CMBLQ96DG6 245 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 PERPQ96FX8 193 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 VRK1Q99986 396 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-218ENST00000555213 RAB1BQ9H0U4 201 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 NOX4Q9NPH5 578 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 SNTG1Q9NSN8 517 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF701Q9NV72 531 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-218ENST00000555213 GSTK1Q9Y2Q3 226 aa9.33□□□□□ -0.92
SHMT2-218ENST00000555213 GGT3PA6NGU5 568 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 H3BSH0 61 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 P2RY10O00398 339 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 NCR1O76036 304 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 SERPINA3P01011 423 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 PAX1P15863 534 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 ADRA2CP18825 462 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 SRMP19623 302 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 KITLGP21583 273 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 CCL1P22362 96 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 ALDH3B1P43353 468 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 MTNR1BP49286 362 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms