RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 E9PQ18 207 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 LGALS8O00214 317 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 MITFO75030 526 aaPredicted RBP11.14□□□□□ -0.63
CDX2-202ENST00000548877 FAM20BO75063 409 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 CLIC3O95833 236 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 ECDO95905 644 aaPredicted RBP11.14□□□□□ -0.63
CDX2-202ENST00000548877 OSMP13725 252 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 ATP6V1B1P15313 513 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 FPR3P25089 353 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 ISL1P61371 349 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 HIST1H3AP68431 136 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 HIST2H3PS2Q5TEC6 136 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 ZNF770Q6IQ21 691 aaPredicted RBP11.14□□□□□ -0.63
CDX2-202ENST00000548877 C1orf94Q6P1W5 598 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 C11orf88Q6PI97 169 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 ZNF773Q6PK81 442 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 HIST2H3AQ71DI3 136 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 OR9Q2Q8NGE9 314 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 BPIFA2Q96DR5 249 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 FUZQ9BT04 418 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 TEX12Q9BXU0 123 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 SMURF1Q9HCE7 757 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 TRIM36Q9NQ86 728 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 CAB39Q9Y376 341 aaPredicted RBP11.14□□□□□ -0.63
CDX2-202ENST00000548877 PCDHGB5Q9Y5G0 923 aa11.14□□□□□ -0.63
CDX2-202ENST00000548877 IGHV3-64DA0A0J9YX35 117 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 RNASEK-C17orf49H0YIS7 233 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 FCN3O75636 299 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 HLA-DPB1P04440 258 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 DBHP09172 617 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 FBP1P09467 338 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 EEF1B2P24534 225 aaKnown RBP11.13□□□□□ -0.63
CDX2-202ENST00000548877 GGT2P36268 569 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 ARF6P62330 175 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 KCNMB1Q16558 191 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 KRTAP27-1Q3LI81 207 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 CDONQ4KMG0 1287 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 VAX1Q5SQQ9 334 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 SLC35E4Q6ICL7 350 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 Q6ZTK2 550 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 RNF113BQ8IZP6 322 aaKnown RBP11.13□□□□□ -0.63
CDX2-202ENST00000548877 C19orf18Q8NEA5 215 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 SLC7A13Q8TCU3 470 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 GNPDA2Q8TDQ7 276 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
CDX2-202ENST00000548877 COQ7Q99807 217 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 PRRG3Q9BZD7 231 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 NECAP2Q9NVZ3 263 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 RHCGQ9UBD6 479 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 RNF7Q9UBF6 113 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 SNX5Q9Y5X3 404 aa11.13□□□□□ -0.63
CDX2-202ENST00000548877 TRAV38-1A0A0B4J264 116 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 A0A1B0GVI7 797 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 PRSS37A4D1T9 235 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 BTBD17A6NE02 478 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 H7C1C5 153 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 ADAM20O43506 726 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 GASTP01350 101 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 TFAP2AP05549 437 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 IFI30P13284 250 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 CTLA4P16410 223 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 CRHBPP24387 322 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 SLC9A3P48764 834 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 EFNB2P52799 333 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 CRISP1P54107 249 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 LCN6P62502 163 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 MPPED2Q15777 294 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 RSPO1Q2MKA7 263 aaPredicted RBP11.12□□□□□ -0.63
CDX2-202ENST00000548877 PGBD2Q6P3X8 592 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 ZNF730Q6ZMV8 503 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 FAM122BQ7Z309 247 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 LY6G5BQ8NDX9 201 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 BHLHE23Q8NDY6 225 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 OR5R1Q8NH85 324 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
CDX2-202ENST00000548877 NIPSNAP1Q9BPW8 284 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 HCAR1Q9BXC0 346 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 HDHD2Q9H0R4 259 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 CNTD2Q9H8S5 307 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 TMEM5Q9Y2B1 443 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 TENM3Q9P273 2699 aa11.12□□□□□ -0.63
CDX2-202ENST00000548877 TRAV27A0A087WT01 109 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 ZAR1LA6NP61 321 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 SLC1A7O00341 560 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 RER1O15258 196 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 CD14P08571 375 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 POLR2IP36954 125 aaKnown RBP11.11□□□□□ -0.63
CDX2-202ENST00000548877 KIR2DS4P43632 304 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 ALDH3B2P48448 385 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 PRKCDQ05655 676 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 MESTQ5EB52 335 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 MBOAT2Q6ZWT7 520 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 BTN2A1Q7KYR7 527 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 GLB1L2Q8IW92 636 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms