RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 HIST1H1EP10412 219 aaKnown RBP7.82□□□□□ -1.16
ATXN3-216ENST00000545170 HOXB2P14652 356 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 GLULP15104 373 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 PRLHRP49683 370 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 SLC37A1P57057 533 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 SP3Q02447 781 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 CDK5R1Q15078 307 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 PTOV1Q86YD1 416 aa7.82□□□□□ -1.16
ATXN3-216ENST00000545170 ISG20Q96AZ6 181 aaKnown RBP7.82□□□□□ -1.16
ATXN3-216ENST00000545170 A0A1W2PP55 124 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 LMX1BO60663 402 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 HIST1H1TP22492 207 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 PSMB5P28074 263 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 BSGP35613 385 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 SP6Q3SY56 376 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 CISD2Q8N5K1 135 aaKnown RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ROBO4Q8WZ75 1007 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 FGF20Q9NP95 211 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ADAP1O75689 374 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 NDUFB7P17568 137 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 DYNLT3P51808 116 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 LY6G5CQ5SRR4 150 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ZNF362Q5T0B9 420 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ARHGEF39Q8N4T4 335 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 BARHL1Q9BZE3 327 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 PLIN4Q96Q06 1357 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 SERINC4A6NH21 518 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ADAM20O43506 726 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ABLIM3O94929 683 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 CD14P08571 375 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 OR6C1Q96RD1 312 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 RASL12Q9NYN1 266 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 SPEF2Q9C093 1822 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 CORTO00230 105 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 GNG7O60262 68 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 CTAG1AP78358 180 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 OR1C1Q15619 314 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 PKDCCQ504Y2 493 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 RAB7BQ96AH8 199 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 PRKRAO75569 313 aaKnown RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 TMEM33P57088 247 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 C1orf61Q13536 156 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 VWA2Q5GFL6 755 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ABI3BPQ7Z7G0 1075 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 MARCH3Q86UD3 253 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 OR52E1Q8NGJ3 308 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ZNF775Q96BV0 537 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 EID2BQ96D98 161 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 Q96M85 177 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 SHPRHQ149N8 1683 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 G3V3Y1 287 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 GJB3O75712 270 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 GPX2P18283 190 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 NPBWR2P48146 333 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 EGR3Q06889 387 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ERV3-1Q14264 604 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 ACER2Q5QJU3 275 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 RHBDD2Q6NTF9 364 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 MRPL54Q6P161 138 aaKnown RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 FAHD1Q6P587 224 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 VHLLQ6RSH7 139 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 LHFPL2Q6ZUX7 228 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 KLHDC7BQ96G42 594 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 SPAG8Q99932 426 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-216ENST00000545170 P4HTMQ9NXG6 502 aa7.81□□□□□ -1.16
ATXN3-216ENST00000545170 LRRC3CA6NJW4 275 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 DUX1O43812 170 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 EPHA2P29317 976 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 ERHP84090 104 aaKnown RBP7.8□□□□□ -1.16
ATXN3-216ENST00000545170 SLC38A11Q08AI6 406 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 OR8B8Q15620 311 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 MPV17LQ2QL34 196 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 EOGTQ5NDL2 527 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 LRRTM3Q86VH5 581 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 OR10G4Q8NGN3 311 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 OR10G9Q8NGN4 311 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 OR10G7Q8NGN6 311 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 RNF133Q8WVZ7 376 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 ALG14Q96F25 216 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 TECRQ9NZ01 308 aaKnown RBP7.8□□□□□ -1.16
ATXN3-216ENST00000545170 MROH1Q8NDA8 1641 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 IGKV6D-41A0A0C4DH26 115 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 IGHA1P01876 353 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 ARF6P62330 175 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 RING1Q06587 406 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 ZNF506Q5JVG8 444 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 SPNS3Q6ZMD2 512 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 DERL1Q9BUN8 251 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 GHITMQ9H3K2 345 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 CMC2Q9NRP2 79 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 FAM206AQ9NX38 181 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 MCTS1Q9ULC4 181 aaKnown RBP7.8□□□□□ -1.16
ATXN3-216ENST00000545170 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 SLIT3O75094 1523 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 TMED7-TICAM2A0A0A6YYA0 188 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 OR2W5A6NFC9 320 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 OR4C45A6NMZ5 311 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 GRPP07492 148 aa7.8□□□□□ -1.16
ATXN3-216ENST00000545170 CD1BP29016 333 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms