RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ENPP5Q9UJA9 477 aa13.29□□□□□ -0.28
CNN1-202ENST00000535659 DHDHQ9UQ10 334 aa13.29□□□□□ -0.28
CNN1-202ENST00000535659 SF3B6Q9Y3B4 125 aaKnown RBP13.29□□□□□ -0.28
CNN1-202ENST00000535659 CACNA1DQ01668 2161 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 MYO9AB2RTY4 2548 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 A6NIN4 97 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 CCRL2O00421 344 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 OCM2P0CE71 109 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 FAHP16930 419 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 CA6P23280 308 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 TRAM1Q15629 374 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 SSX1Q16384 188 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 ZMAT1Q5H9K5 638 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 OR13C5Q8NGS8 318 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 TSEN15Q8WW01 171 aaKnown RBP13.28□□□□□ -0.28
CNN1-202ENST00000535659 IGFBPL1Q8WX77 278 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 PIGCQ92535 297 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 NRGNQ92686 78 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 PIGTQ969N2 578 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 TMEM203Q969S6 136 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 PLEKHA1Q9HB21 404 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 ZDHHC8Q9ULC8 765 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 EDARQ9UNE0 448 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 MPC1Q9Y5U8 109 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 TACC2O95359 2948 aa13.28□□□□□ -0.28
CNN1-202ENST00000535659 NOTCH2Q04721 2471 aa13.27□□□□□ -0.28
CNN1-202ENST00000535659 A0A1B0GWJ7 208 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 ZSCAN5BA6NJL1 495 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 C17orf100A8MU93 164 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 OVOL3O00110 214 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 GMDSO60547 372 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 SERPINA3P01011 423 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 PSMA1P25786 263 aaKnown RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 GNALP38405 381 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 SOX2P48431 317 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 PPOXP50336 477 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 RPS25P62851 125 aaKnown RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 Q499Y3 187 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 ACSM3Q53FZ2 586 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 CLVS2Q5SYC1 327 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 UNQ9370/PRO34162Q6UXP9 181 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 SERPINA12Q8IW75 414 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 ZCCHC24Q8N2G6 241 aaKnown RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 GTF3AQ92664 365 aaKnown RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 ADAT3Q96EY9 351 aaPredicted RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 VRK1Q99986 396 aaPredicted RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 PAPOLGQ9BWT3 736 aaKnown RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 CACNG6Q9BXT2 260 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 NDUFB11Q9NX14 153 aa13.27□□□□□ -0.29
CNN1-202ENST00000535659 RAI1Q7Z5J4 1906 aaPredicted RBP13.27□□□□□ -0.29
CNN1-202ENST00000535659 ZNF850A8MQ14 1090 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 ZNF879B4DU55 563 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 H0YL77 283 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 SPRY3O43610 288 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 NRASP01111 189 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 IGHV1-46P01743 117 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 HLA-DPB1P04440 258 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 TFAP2AP05549 437 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 CD2P06729 351 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 ADH4P08319 380 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 ZNF20P17024 532 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 GABRA5P31644 462 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 PRDX4Q13162 271 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 TMEM42Q69YG0 159 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 PARP16Q8N5Y8 322 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 OR2Z1Q8NG97 314 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 OR5D14Q8NGL3 314 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 PP6455Q8WZ26 134 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 TMEM106AQ96A25 262 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 HIST1H2AAQ96QV6 131 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 CCL19Q99731 98 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 PPP1R3EQ9H7J1 279 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 SCOCQ9UIL1 159 aa13.26□□□□□ -0.29
CNN1-202ENST00000535659 NOP16Q9Y3C1 178 aaKnown RBP13.26□□□□□ -0.29
CNN1-202ENST00000535659 MLNRO43193 412 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 SC5DO75845 299 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 RAF1P04049 648 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 OR8G1Q15617 311 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 PAMR1Q6UXH9 720 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 MOB3CQ70IA8 216 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 SPERTQ8NA61 448 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 THRSPQ92748 146 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 OR14A2Q96R54 314 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 CXorf56Q9H5V9 222 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 ABCB9Q9NP78 766 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 UNC79Q9P2D8 2635 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 CSMD2Q7Z408 3487 aa13.25□□□□□ -0.29
CNN1-202ENST00000535659 A0A1W2PPK0 400 aa13.24□□□□□ -0.29
CNN1-202ENST00000535659 ANKRD61A6NGH8 418 aa13.24□□□□□ -0.29
CNN1-202ENST00000535659 ANXA2P2A6NMY6 339 aa13.24□□□□□ -0.29
CNN1-202ENST00000535659 H7C417 338 aa13.24□□□□□ -0.29
CNN1-202ENST00000535659 GATBO75879 557 aaKnown RBP13.24□□□□□ -0.29
CNN1-202ENST00000535659 CD36P16671 472 aa13.24□□□□□ -0.29
CNN1-202ENST00000535659 MAPK3P27361 379 aaPredicted RBP13.24□□□□□ -0.29
CNN1-202ENST00000535659 CDKN1AP38936 164 aa13.24□□□□□ -0.29
CNN1-202ENST00000535659 INSL4Q14641 139 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms