RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 HES2Q9Y543 173 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 RTEL1-TNFRSF6BF6WH68 1400 aa-0.32□□□□□ -2.46
COPB1-212ENST00000534771 CLUHO75153 1309 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 IGLV3-9A0A075B6K5 115 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 IGHV3OR16-9A0A0B4J2B5 98 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 CCL15-CCL14A0A0B4J2E2 113 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 A0A0G2JQZ4 141 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 RNF103-CHMP3A0A140T963 221 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 XKRY2A2RUG3 117 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 BTBD17A6NE02 478 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 H7C1H1 209 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 TP53I11O14683 189 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PSTPIP1O43586 416 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 TRAPPC3O43617 180 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PSIP1O75475 530 aaKnown RBP-0.33□□□□□ -2.46
COPB1-212ENST00000534771 TGM6O95932 706 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 IGKV1D-33P01593 117 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 IGKV1-33P01594 117 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PTHLHP12272 177 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 NCK1P16333 377 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 ATP6V1C1P21283 382 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 CCR7P32248 378 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 BMI1P35226 326 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 CFHR2P36980 270 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 NSG1P42857 185 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 RABIFP47224 123 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 TUFMP49411 452 aaKnown RBP-0.33□□□□□ -2.46
COPB1-212ENST00000534771 GMFBP60983 142 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 ART3Q13508 389 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 MAPRE2Q15555 327 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 ZNF726P1Q15940 193 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 CCL15Q16663 113 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 IMMTQ16891 758 aaKnown RBP-0.33□□□□□ -2.46
COPB1-212ENST00000534771 SPIN4Q56A73 249 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 TTC23Q5W5X9 447 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 LGALS9CQ6DKI2 356 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 NOXRED1Q6NXP6 359 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 AMN1Q8IY45 258 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 FAM71AQ8IYT1 594 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PRELID2Q8N945 189 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 OR6Q1Q8NGQ2 317 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 OR4X1Q8NH49 305 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 RAB3IL1Q8TBN0 382 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 APH1BQ8WW43 257 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 CDS1Q92903 461 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 EEF1AKMT3Q96AZ1 226 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 FXYD5Q96DB9 178 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 SENP8Q96LD8 212 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PPP1R36Q96LQ0 422 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 RPRD1AQ96P16 312 aaPredicted RBP-0.33□□□□□ -2.46
COPB1-212ENST00000534771 SPXQ9BT56 116 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 TIMM21Q9BVV7 248 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 RRAGDQ9NQL2 400 aaPredicted RBP-0.33□□□□□ -2.46
COPB1-212ENST00000534771 NINJ2Q9NZG7 142 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 CHRNA9Q9UGM1 479 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PSORS1C2Q9UIG4 136 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PIGLQ9Y2B2 252 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 MRPS16Q9Y3D3 137 aaKnown RBP-0.33□□□□□ -2.46
COPB1-212ENST00000534771 COMMD3-BMI1R4GMX3 469 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 PTPRKQ15262 1439 aa-0.33□□□□□ -2.46
COPB1-212ENST00000534771 C2orf16Q68DN1 1984 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 MPDZO75970 2070 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 MDC1Q14676 2089 aaKnown RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 SDK1Q7Z5N4 2213 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 A0A0J9YYE9 177 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 A0A1W2PRQ8 180 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 TMEM72A0PK05 275 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 GMNCA6NCL1 334 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 SMKR1H3BMG3 65 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 RAD1O60671 282 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 FKBP6O75344 327 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 CLPXO76031 633 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 FGFR1OPO95684 399 aaKnown RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 TRBC1P01850 177 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 SERPINA5P05154 406 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 SEC11BP0C7V7 166 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 MYL9P24844 172 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 IL3RAP26951 378 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 CD70P32970 193 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 GABRA4P48169 554 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 CCT3P49368 545 aaKnown RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 STXBP1P61764 594 aaKnown RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 DDX39BQ13838 428 aaKnown RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 USH1GQ495M9 461 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 HHATQ5VTY9 493 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 AKNAQ7Z591 1439 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 PSTKQ8IV42 348 aaKnown RBP-0.34□□□□□ -2.46
COPB1-212ENST00000534771 ZNF738Q8NE65 137 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 SLC7A13Q8TCU3 470 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 RSPH1Q8WYR4 309 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 S100PBPQ96BU1 408 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 BTN2A3PQ96KV6 586 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 TCEANC2Q96MN5 208 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 Q96MT0 163 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 PSKH2Q96QS6 385 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 TRIM62Q9BVG3 475 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 SFXN3Q9BWM7 321 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 AICDAQ9GZX7 198 aa-0.34□□□□□ -2.46
COPB1-212ENST00000534771 HSD3B7Q9H2F3 369 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms