RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 KIR3DL2P43630 455 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 CDH15P55291 814 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 SEC61A1P61619 476 aaKnown RBP11.25□□□□□ -0.61
CMTM1-219ENST00000533953 CSNK2BP67870 215 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 SLC3A1Q07837 685 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
CMTM1-219ENST00000533953 LRRC28Q86X40 367 aaPredicted RBP11.25□□□□□ -0.61
CMTM1-219ENST00000533953 CATSPERDQ86XM0 798 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 C11orf53Q8IXP5 236 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 OR52I1Q8NGK6 324 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 OR8S1Q8NH09 359 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 RDH12Q96NR8 316 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 SLC22A4Q9H015 551 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 RGCCQ9H4X1 137 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 ISG20L2Q9H9L3 353 aaKnown RBP11.25□□□□□ -0.61
CMTM1-219ENST00000533953 TMEM165Q9HC07 324 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 SNX5Q9Y5X3 404 aa11.25□□□□□ -0.61
CMTM1-219ENST00000533953 ANK3Q12955 4377 aaKnown RBP11.24□□□□□ -0.61
CMTM1-219ENST00000533953 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 MPZL2O60487 215 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 IGLV3-1P01715 115 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 IGHV2-5P01817 119 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 GNALP38405 381 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 GATA4P43694 442 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 ISL1P61371 349 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 BTG1P62324 171 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 WDR38Q5JTN6 314 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 CEP78Q5JTW2 689 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 SFRP4Q6FHJ7 346 aaPredicted RBP11.24□□□□□ -0.61
CMTM1-219ENST00000533953 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 LYPD2Q6UXB3 125 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 MOB3CQ70IA8 216 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 ACBD7Q8N6N7 88 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 LINC01356Q8N9X3 169 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 CSNK2A3Q8NEV1 391 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 HPSE2Q8WWQ2 592 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 HPS1Q92902 700 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 SEH1LQ96EE3 360 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 C1orf159Q96HA4 380 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 Q96MT0 163 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 ZNF649Q9BS31 505 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 ADI1Q9BV57 179 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 RNPEPL1Q9HAU8 725 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
CMTM1-219ENST00000533953 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 DYSFO75923 2080 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 ABCA2Q9BZC7 2435 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 E9PI62 339 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 PLPP2O43688 288 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 SULT1C4O75897 302 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 CST4P01036 141 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 EGR1P18146 543 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 CAPGP40121 348 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 MAP2K3P46734 347 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 NANOS3P60323 173 aaKnown RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 GMFBP60983 142 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 LCN2P80188 198 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 CDONQ4KMG0 1287 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 FAM166AQ6J272 317 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 CELF2-AS1Q8N7Q2 184 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 SEMA6DQ8NFY4 1073 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 OR1M1Q8NGA1 313 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 OR11L1Q8NGX0 322 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 OR14K1Q8NGZ2 314 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 RPL3LQ92901 407 aaKnown RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 ITPKCQ96DU7 683 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 RNF170Q96K19 258 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 C4orf36Q96KX1 117 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 ALG8Q9BVK2 526 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 FN3KRPQ9HA64 309 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 GPR173Q9NS66 373 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 PCDHB10Q9UN67 800 aa11.23□□□□□ -0.61
CMTM1-219ENST00000533953 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-219ENST00000533953 PPIAL4EA0A075B759 164 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 ZNF816-ZNF321PA0A0X1KG74 233 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 hCG_1807616A0A1W2PRN6 198 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 SNTNA6NMZ2 147 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 B4DSR2 109 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 PPIAL4DF5H284 164 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 CDIPTO14735 213 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 CRLF1O75462 422 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
CMTM1-219ENST00000533953 PPIAL4FP0DN26 164 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 IRF2P14316 349 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 AQP4P55087 323 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 ACTC1P68032 377 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 ACTA1P68133 377 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 RIPPLY1Q0D2K3 151 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 ZNF154Q13106 437 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 FAM220AQ7Z4H9 259 aa11.22□□□□□ -0.61
CMTM1-219ENST00000533953 THAP5Q7Z6K1 395 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms