RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GNGT2O14610 69 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TSPAN4O14817 238 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 RNF13O43567 381 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 EIF1BO60739 113 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 E2F6O75461 281 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TRMUO75648 421 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 LYZL6O75951 148 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NDUFB2O95178 105 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 MPZL1O95297 269 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SYNGR4O95473 234 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 STAMBPO95630 424 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ATP6V1G2O95670 118 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SNAP29O95721 258 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 BAG2O95816 211 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CLIC3O95833 236 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TXNDC12O95881 172 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TSHBP01222 138 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 GYPBP06028 91 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 YES1P07947 543 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ADRA2AP08913 450 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 GNAO1P09471 354 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 IGHV4-38-2P0DP08 117 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ANXA8P13928 327 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 HIST1H1CP16403 213 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF43P17038 809 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 COX5AP20674 150 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 IGHV1-2P23083 117 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 FKBP2P26885 142 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 GTF2E2P29084 291 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 PTGER4P35408 488 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 GCKP35557 465 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ACVR1BP36896 505 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 RBMXP38159 391 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 OR3A2P47893 321 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ALDH3A2P51648 485 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF133P52736 654 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CRISP1P54107 249 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CLDN17P56750 224 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 RPL27P61353 136 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 VAMP2P63027 116 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CDK5Q00535 292 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 IL1RL1Q01638 556 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SPOCK1Q08629 439 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NPRL3Q12980 569 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CAMK2DQ13557 499 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 PDK3Q15120 406 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 PTGES3Q15185 160 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TRIP10Q15642 601 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ACKR1Q16570 336 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 HIST3H3Q16695 136 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 LRRC36Q1X8D7 754 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 RFX4Q33E94 735 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 C9orf135Q5VTT2 229 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CARD17Q5XLA6 110 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 C12orf73Q69YU5 71 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TMEM225Q6GV28 225 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 LAIR2Q6ISS4 152 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ZFP1Q6P2D0 407 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NIPAL3Q6P499 406 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SLC25A47Q6Q0C1 308 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SMARCD3Q6STE5 483 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CASP12Q6UXS9 341 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 STAC2Q6ZMT1 411 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SLC35D2Q76EJ3 337 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 P4HA3Q7Z4N8 544 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SH2D6Q7Z4S9 175 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 PXKQ7Z7A4 578 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 HIPK1Q86Z02 1210 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 C20orf196Q8IYI0 205 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 GABRG1Q8N1C3 465 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SLC43A2Q8N370 569 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SVOPLQ8N434 492 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CBR4Q8N4T8 237 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 C10orf53Q8N6V4 93 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 CYB561A3Q8NBI2 242 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ACBD4Q8NC06 268 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SLC37A3Q8NCC5 494 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SDR9C7Q8NEX9 313 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 BBS1Q8NFJ9 593 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 OR6K3Q8NGY3 331 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 MAGEE2Q8TD90 523 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TMEM54Q969K7 222 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 MCHR2Q969V1 340 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NABP1Q96AH0 204 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 DTNBP1Q96EV8 351 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 HARBI1Q96MB7 349 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF75AQ96N20 296 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 OXGR1Q96P68 337 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TSSK2Q96PF2 358 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 ERMAPQ96PL5 475 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NMNAT3Q96T66 252 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NAA11Q9BSU3 229 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 TSSK6Q9BXA6 273 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 HCAR1Q9BXC0 346 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 GABARAPL3Q9BY60 117 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 MRPL13Q9BYD1 178 aaKnown RBP2.5□□□□□ -2.01
CSDE1-208ENST00000524652 PRRG4Q9BZD6 226 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 NMNAT2Q9BZQ4 307 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 KLHL4Q9C0H6 718 aa2.5□□□□□ -2.01
CSDE1-208ENST00000524652 SYT4Q9H2B2 425 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms