RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TBL1XR1Q9BZK7 514 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF442Q9H7R0 627 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TUBA4BQ9H853 241 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DCAF16Q9NXF7 216 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DOCK10Q96BY6 2186 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 LOC102724200A0A096LPH7 203 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 G3V3Q6 166 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CDH16O75309 829 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ENTPD6O75354 484 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FARS2O95363 451 aaKnown RBP0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IGKV1-39P01597 117 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IGHV3-53P01767 116 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IGKV1D-39P04432 117 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PFN2P35080 140 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IFNAR2P48551 515 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RGS6P49758 472 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RAB7AP51149 207 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RPL23AP62750 156 aaKnown RBP0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ATP5G2Q06055 141 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 KDSRQ06136 332 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PRDX4Q13162 271 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TRAM2Q15035 370 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MAPRE2Q15555 327 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 XKR7Q5GH72 579 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 HHATQ5VTY9 493 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 NBPF5PQ86XG9 351 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PDPNQ86YL7 162 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RNF10Q8N5U6 811 aaKnown RBP0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TUBGCP3Q96CW5 907 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PEBP4Q96S96 227 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SFXN3Q9BWM7 321 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PLEKHF2Q9H8W4 249 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CYP3A43Q9HB55 503 aa0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MRM3Q9HC36 420 aaKnown RBP0.59□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TENM3Q9P273 2699 aa0.59□□□□□ -2.32
RNU6-1088P-201ENST00000516850 IGKV1-6A0A0C4DH72 117 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SIRPB1O00241 398 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SCAMP2O15127 329 aaKnown RBP0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SERPINA3P01011 423 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CSNK2A2P19784 350 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 BMI1P35226 326 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GGT2P36268 569 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NUDT2P50583 147 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CHIT1Q13231 466 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 REEP3Q6NUK4 255 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TTC23LQ6PF05 361 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TRMT10CQ7L0Y3 403 aaKnown RBP0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZNF567Q8N184 647 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TXNDC17Q9BRA2 123 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GON7Q9BXV9 100 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RACGAP1Q9H0H5 632 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 LRRC19Q9H756 370 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 COMMD3-BMI1R4GMX3 469 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NUP205Q92621 2012 aa0.58□□□□□ -2.32
RNU6-1088P-201ENST00000516850 KMT2EQ8IZD2 1858 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 IGKV1OR2-108A0A075B7D4 117 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 C19orf71A6NCJ1 209 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 IGLL5B9A064 214 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 LSM8O95777 96 aaKnown RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 GUCA1CO95843 209 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CST1P01037 141 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 EIF2S2P20042 333 aaKnown RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 USF1P22415 310 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PBLDP30039 288 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RRM2P31350 389 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ERFP50548 548 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RAB9AP51151 201 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZNF140P52738 457 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TRDNQ13061 729 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SS18Q15532 418 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PRAMEF5Q5TYX0 476 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PRAMEF6Q5VXH4 476 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 RNASEKQ6P5S7 137 aaKnown RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 METAP1DQ6UB28 335 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TMEM107Q6UX40 140 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 COMTD1Q86VU5 262 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CBLN2Q8IUK8 224 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 UBE2J2Q8N2K1 259 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZFP62Q8NB50 900 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR52M1Q8NGK5 317 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 S100PBPQ96BU1 408 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 SNF8Q96H20 258 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TEAD3Q99594 435 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 API5Q9BZZ5 524 aaKnown RBP0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 LRRC40Q9H9A6 602 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ZNF286AQ9HBT8 521 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 FAM60AQ9NP50 221 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 OR51B4Q9Y5P0 310 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 ICOSQ9Y6W8 199 aa0.57□□□□□ -2.32
RNU6-1088P-201ENST00000516850 A0A0A6YYD5 115 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 A0A0G2JMP0 313 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 A0A0X1KG70 313 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 C9JVG2 144 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 AP3B1O00203 1094 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NDUFAB1O14561 156 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 NDC80O14777 642 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 CLOCKO15516 846 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 TRBV12-3P01733 135 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 PGA5P0DJD9 388 aa0.56□□□□□ -2.32
RNU6-1088P-201ENST00000516850 DESP17661 470 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms