RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 RAB19A4D1S5 217 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 MPTX1A8MV57 137 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 TOR1AO14656 332 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 ZIC3O60481 467 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 IFNA6P05013 189 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 ICAM2P13598 275 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 RAB3AP20336 220 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 CNR1P21554 472 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 ADH6P28332 368 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 PRKXP51817 358 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 IL13RA1P78552 427 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 CHAF1BQ13112 559 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 ACER2Q5QJU3 275 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 TRAPPC6BQ86SZ2 158 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 OR1M1Q8NGA1 313 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 OR51A2Q8NGJ7 313 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 SLC25A43Q8WUT9 341 aaPredicted RBP9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 NTNG2Q96CW9 530 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 MRPS24Q96EL2 167 aaKnown RBP9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 VRK1Q99986 396 aaPredicted RBP9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 IFT46Q9NQC8 304 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 COQ3Q9NZJ6 369 aa9.73□□□□□ -0.85
SH3RF1-203ENST00000508685 TMEM235A6NFC5 223 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SULT2B1O00204 365 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 TM4SF5O14894 197 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SYT7O43581 403 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 TRAF3IP2O43734 574 aaPredicted RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 DUS4LO95620 317 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 DSCR4P56555 118 aaPredicted RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 LINC00346Q8IVM7 164 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 UEVLDQ8IX04 471 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 OR4D6Q8NGJ1 314 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 PSMF1Q92530 271 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SGCZQ96LD1 299 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 ARPC5LQ9BPX5 153 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 C1QTNF6Q9BXI9 259 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 FAM206AQ9NX38 181 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 TAS2R3Q9NYW6 316 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 GPR160Q9UJ42 338 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 DKKL1Q9UK85 242 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 VSIG4Q9Y279 399 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 RHBDD3Q9Y3P4 386 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 DOCK10Q96BY6 2186 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 BOD1L1Q8NFC6 3051 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 A0A087WZY1 265 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 IGHV3-15A0A0B4J1V0 119 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 A0A0B4J2A0 478 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 LOC101059948A0A1B0GTJ6 334 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 LGALS8O00214 317 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 P2RY10O00398 339 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 TERTO14746 1132 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 TNFSF15O95150 251 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SERPINA7P05543 415 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 FCER2P06734 321 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 GSTP1P09211 210 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 CX3CR1P49238 355 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 QRFPP83859 136 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 NAAAQ02083 359 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 EIF3IQ13347 325 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SNTB1Q13884 538 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 TRIP6Q15654 476 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 H3F3CQ6NXT2 135 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 ZNF529Q6P280 563 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 PGAP1Q75T13 922 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 CHST4Q8NCG5 386 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 ADPRHL1Q8NDY3 354 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 OR10R2Q8NGX6 335 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 PPP1R1CQ8WVI7 109 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 FGGYQ96C11 551 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 THOC3Q96J01 351 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 MRPL13Q9BYD1 178 aaKnown RBP9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 CNTD2Q9H8S5 307 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 CENPMQ9NSP4 180 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 KLHL13Q9P2N7 655 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SHPKQ9UHJ6 478 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 HDGFL3Q9Y3E1 203 aa9.72□□□□□ -0.85
SH3RF1-203ENST00000508685 SPTBN2O15020 2390 aa9.71□□□□□ -0.85
SH3RF1-203ENST00000508685 AQP7P3A6NL99 342 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 P04436 131 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 RFPL3SP0C7P2 107 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 PGA4P0DJD7 388 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 PGA3P0DJD8 388 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 IL32P24001 234 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 GNALP38405 381 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 CBX5P45973 191 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 PNLIPRP3Q17RR3 467 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 MOGAT2Q3SYC2 334 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 CARD17Q5XLA6 110 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 TMPPEQ6ZT21 453 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 CD163Q86VB7 1156 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 ARRDC1Q8N5I2 433 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 ACBD4Q8NC06 268 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 STOML3Q8TAV4 291 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 MARC2Q969Z3 335 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 SLAMF6Q96DU3 332 aa9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 ZNF471Q9BX82 626 aaPredicted RBP9.71□□□□□ -0.86
SH3RF1-203ENST00000508685 NMES1Q9C002 83 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms