RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 C1GALT1C1Q96EU7 318 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 HYLS1Q96M11 299 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM56Q96MV1 263 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 RBP7Q96R05 134 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 MRPL13Q9BYD1 178 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SLIRPQ9GZT3 109 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 VCX2Q9H322 139 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF160Q9HCG1 818 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 MMP25Q9NPA2 562 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 CNOT2Q9NZN8 540 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 KLRF1Q9NZS2 232 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FOXJ2Q9P0K8 574 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SLC35A3Q9Y2D2 325 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 LOXL2Q9Y4K0 774 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 HS3ST3B1Q9Y662 390 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM56-RWDD3S4R434 201 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 A0A1W2PNV4 684 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 HCN1O60741 890 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 RCBTB2O95199 551 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 RAB36O95755 333 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FGF5P12034 268 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 PAX1P15863 534 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 MYL12AP19105 171 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SPINK2P20155 84 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SERPINA2P20848 420 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 OTX2P32243 289 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 CTBP2P56545 445 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 OR12D2P58182 307 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 RPS25P62851 125 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 RPL18Q07020 188 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF74Q16587 644 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 WBP2NLQ6ICG8 309 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 NIPAL3Q6P499 406 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 PAMR1Q6UXH9 720 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 OR5M8Q8NGP6 311 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 DYNC2LI1Q8TCX1 351 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 HGDQ93099 445 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 ORAI1Q96D31 301 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 JSRP1Q96MG2 331 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 GNRHR2Q96P88 292 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SORCS2Q96PQ0 1159 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 RASL10BQ96S79 203 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 NDUFAF3Q9BU61 184 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 DEFB126Q9BYW3 111 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SLC5A7Q9GZV3 580 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FKRPQ9H9S5 495 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 KRCC1Q9NPI7 259 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 CMC2Q9NRP2 79 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 GNG8Q9UK08 70 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 A0A1W2PQL4 384 aaPredicted RBP5.46□□□□□ -1.53
SSBP1-213ENST00000496622 SHISA3A0PJX4 238 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 FABP12A6NFH5 140 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 TVP23AA6NH52 213 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 KLRC4-KLRK1H3BQV0 150 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 K7EP13 123 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 EFNA2O43921 213 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 SUSD5O60279 629 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 NCR1O76036 304 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 NDUFB2O95178 105 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 TFP02787 698 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 SCG5P05408 212 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 FGF2P09038 288 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 C1QTNF9P0C862 333 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 CXCR1P25024 350 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 ACVR1BP36896 505 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 CRYBB2P43320 205 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 NRG3P56975 720 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 CTXN1P60606 82 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 E2F1Q01094 437 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 DHODHQ02127 395 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 CBFBQ13951 182 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 GAMTQ14353 236 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 IL11RAQ14626 422 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 TGIF1Q15583 401 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 BVESQ8NE79 360 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 PROKR2Q8NFJ6 384 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 OR11G2Q8NGC1 345 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 OR13C5Q8NGS8 318 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 RXFP4Q8TDU9 374 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 SNHG12Q9BXW3 62 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 ERVK13-1Q9NX77 482 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 MTCH1Q9NZJ7 389 aa5.46□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM72A0PK05 275 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 FBLL1A6NHQ2 334 aaKnown RBP5.46□□□□□ -1.54
SSBP1-213ENST00000496622 CD8B2A6NJW9 211 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 RIIAD1A6NNX1 92 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 PRR32B1ATL7 298 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 MKRN2OSH3BPM6 223 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 J3QLW9 94 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 TP53I11O14683 189 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 PPIHO43447 177 aaKnown RBP5.46□□□□□ -1.54
SSBP1-213ENST00000496622 JMJD7P0C870 316 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 CD8BP10966 210 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 PIPP12273 146 aaPredicted RBP5.46□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF19P17023 458 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 CCNOP22674 350 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 ACP1P24666 158 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 HTR1FP30939 366 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 NPY4RP50391 375 aa5.46□□□□□ -1.54
SSBP1-213ENST00000496622 DUSP3P51452 185 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms