RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 FADS1O60427 444 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 MGMTP16455 207 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 C2orf76Q3KRA6 126 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 CREB3L2Q70SY1 520 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZNF441Q8N8Z8 693 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 APCDD1LQ8NCL9 501 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 GRPEL2Q8TAA5 225 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 ERRFI1Q9UJM3 462 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 AMDHD2Q9Y303 409 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 CSRP3P50461 194 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 LSM6P62312 80 aaKnown RBP12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 HIKESHIQ53FT3 197 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 HACD4Q5VWC8 232 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 CMBLQ96DG6 245 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 ABHD17AQ96GS6 310 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 FN3KRPQ9HA64 309 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 AIPO00170 330 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 NR4A2P43354 598 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 STOML3Q8TAV4 291 aa12.76□□□□□ -0.37
ARHGEF39-205ENST00000490638 SPRY1O43609 319 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 PMP2P02689 132 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 BGLAPP02818 100 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 TNFAIP6P98066 277 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 RBMS2Q15434 407 aaKnown RBP12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 PRSS35Q8N3Z0 413 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 RAB1BQ9H0U4 201 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 RANBP3Q9H6Z4 567 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 RAXQ9Y2V3 346 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 IFNA4P05014 189 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 LIMS3P0CW19 117 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 LIMS4P0CW20 117 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 DLX5P56178 289 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 IGLV3-21P80748 117 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 KLRB1Q12918 225 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 STX12Q86Y82 276 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR51J1Q9H342 316 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 TAAR3PQ9P1P4 343 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 GLI4P10075 376 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 ATF1P18846 271 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR10A3P58181 314 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 PHLDA2Q53GA4 152 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 HEATR5BQ9P2D3 2071 aa12.75□□□□□ -0.37
ARHGEF39-205ENST00000490638 LGALS8O00214 317 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR8U9P0C7N5 309 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 HAS2Q92819 552 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 SLC23A1Q9UHI7 598 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 TECTAO75443 2155 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 MPDZO75970 2070 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 NDUFB3O43676 98 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 DHRS3O75911 302 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 OSR2Q8N2R0 312 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 NPEPL1Q8NDH3 523 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR51H1Q8NH63 302 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 SLC7A10Q9NS82 523 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 NECAP2Q9NVZ3 263 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 HAO2Q9NYQ3 351 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 ABCA1O95477 2261 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 RP2O75695 350 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 TFP02787 698 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 CTXN2P0C2S0 81 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 CFHR1Q03591 330 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR10X1Q8NGY0 326 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 UBL7Q96S82 380 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 ADGRL4Q9HBW9 690 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 GHRLQ9UBU3 117 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 MTCL1Q9Y4B5 1905 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 CSF3P09919 207 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 NPY4RP50391 375 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 GZMMP51124 257 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 MRPL14Q6P1L8 145 aaKnown RBP12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 C8orf82Q6P1X6 216 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR4D6Q8NGJ1 314 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR56B4Q8NH76 319 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 NUDCD2Q8WVJ2 157 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 DERL3Q96Q80 235 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 TREM1Q9NP99 234 aa12.74□□□□□ -0.37
ARHGEF39-205ENST00000490638 NOTCH4Q99466 2003 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 NTN3O00634 580 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 UPK3AO75631 287 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 APOA2P02652 100 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 MRPS34P82930 218 aaKnown RBP12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 RPL19P84098 196 aaKnown RBP12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 PTP4A1Q93096 173 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 A0A0B4J203 849 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 RAB1CQ92928 201 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 GPR137BO60478 399 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 CNIH1O95406 144 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 IFI6P09912 130 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 PRDX4Q13162 271 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 LRRC10Q5BKY1 277 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 ST8SIA4Q92187 359 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 S1PR3Q99500 378 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms