RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ACTG2P63267 376 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 ZNF85Q03923 595 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 ZNF91Q05481 1191 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 MRPL28Q13084 256 aaKnown RBP13.03□□□□□ -0.32
C9orf3-217ENST00000479161 LRRC36Q1X8D7 754 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 SSX6Q7RTT6 188 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 SPICQ8N5J4 248 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 OR11L1Q8NGX0 322 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 LGALS12Q96DT0 336 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 TLNRD1Q9H1K6 362 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 FN3KRPQ9HA64 309 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 RNPEPL1Q9HAU8 725 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 OR52A1Q9UKL2 312 aa13.03□□□□□ -0.32
C9orf3-217ENST00000479161 ZNF816-ZNF321PA0A0X1KG74 233 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 LOC100289279A0A1B0GTE1 492 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 DAPL1A0PJW8 107 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 IRGMA1A4Y4 181 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 TMEM210A6NLX4 147 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 ANXA2P2A6NMY6 339 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 WBP4O75554 376 aaKnown RBP13.02□□□□□ -0.33
C9orf3-217ENST00000479161 DHRS3O75911 302 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 IGHV2-5P01817 119 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 ACKR3P25106 362 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 GNALP38405 381 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.33
C9orf3-217ENST00000479161 DVL1P1P54792 670 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-217ENST00000479161 PRSS12P56730 875 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 RIPPLY1Q0D2K3 151 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 GALEQ14376 348 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 CATSPERDQ86XM0 798 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 SYS1Q8N2H4 156 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 YIPF7Q8N8F6 280 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 SEMA6DQ8NFY4 1073 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 APH1BQ8WW43 257 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 RORBQ92753 470 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 C10orf35Q96D05 121 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 ITPKCQ96DU7 683 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF665Q9H7R5 613 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 FGF20Q9NP95 211 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-217ENST00000479161 TRIM36Q9NQ86 728 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 GPR84Q9NQS5 396 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 POLR3KQ9Y2Y1 108 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-217ENST00000479161 RHBDD3Q9Y3P4 386 aa13.02□□□□□ -0.33
C9orf3-217ENST00000479161 PPIAL4EA0A075B759 164 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 PPIAL4CA0A0B4J2A2 164 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 A0A1B0GTI1 187 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 PPIAL4DF5H284 164 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 WNT9BO14905 357 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 LMX1BO60663 402 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 FAM20BO75063 409 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 PPIAL4FP0DN26 164 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 IRF2P14316 349 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF12P17014 697 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 IL2RGP31785 369 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 CAPGP40121 348 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 PMELP40967 661 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 CCR9P51686 369 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 MVKQ03426 396 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-217ENST00000479161 RIPK1Q13546 671 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 TMEM42Q69YG0 159 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 DOK3Q7L591 496 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 FAM220AQ7Z4H9 259 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 MOGAT3Q86VF5 341 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 KLHL36Q8N4N3 616 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 OR8S1Q8NH09 359 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 OR51E1Q8TCB6 317 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 OR5P3Q8WZ94 311 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 TBX5Q99593 518 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 MICU1Q9BPX6 476 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF649Q9BS31 505 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 ADI1Q9BV57 179 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 RNF7Q9UBF6 113 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 LPAR3Q9UBY5 353 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 V9GYS6 101 aa13.01□□□□□ -0.33
C9orf3-217ENST00000479161 JMJD1CQ15652 2540 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 TRAV20A0A0B4J274 112 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 F5H0A9 414 aaPredicted RBP13□□□□□ -0.33
C9orf3-217ENST00000479161 NDUFA2O43678 99 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 CRLF1O75462 422 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 TGFAP01135 160 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 LHBP01229 141 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 ISG15P05161 165 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 MSMBP08118 114 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 GATA3P23771 443 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 DCKP27707 260 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 ZMYND11Q15326 602 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 KCNJ8Q15842 424 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 GFOD2Q3B7J2 385 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 CEACAM21Q3KPI0 293 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 AVPI1Q5T686 147 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 OR5A2Q8NGI9 324 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 OR51F2Q8NH61 342 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 TFAP2CQ92754 450 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
C9orf3-217ENST00000479161 GAL3ST1Q99999 423 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 SOX7Q9BT81 388 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms