RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 OR8S1Q8NH09 359 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 ITPKCQ96DU7 683 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 RNFT2Q96EX2 444 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 FAM71F1Q96KD3 344 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-210ENST00000473829 TMEM246Q9BRR3 403 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 FN3KRPQ9HA64 309 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 GPR84Q9NQS5 396 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 C1orf123Q9NWV4 160 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 LPAR3Q9UBY5 353 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTCD3-210ENST00000473829 GTF2A1LQ9UNN4 478 aa15.87■□□□□ 0.13
PTCD3-210ENST00000473829 PPIAL4EA0A075B759 164 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 TRAV20A0A0B4J274 112 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF850A8MQ14 1090 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 PPIAL4DF5H284 164 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 J3QRE1 110 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 RPP14O95059 124 aaKnown RBP15.86■□□□□ 0.13
PTCD3-210ENST00000473829 CST4P01036 141 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 FAM157CP0CG43 387 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 PPIAL4FP0DN26 164 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 ATP6V1E1P36543 226 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 GNALP38405 381 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 CSNK2BP67870 215 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 LCN2P80188 198 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 GABPB1Q06547 395 aaPredicted RBP15.86■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF154Q13106 437 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF404Q494X3 552 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 MEDAGQ5VYS4 303 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 COMMD2Q86X83 199 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 C11orf53Q8IXP5 236 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 C1orf87Q8N0U7 546 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 MUC20Q8N307 709 aaPredicted RBP15.86■□□□□ 0.13
PTCD3-210ENST00000473829 YIPF7Q8N8F6 280 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 PLPP7Q8NBV4 271 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 OR11L1Q8NGX0 322 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 HPSE2Q8WWQ2 592 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 MOB1AQ9H8S9 216 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 C14orf119Q9NWQ9 140 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 SMPD3Q9NY59 655 aaPredicted RBP15.86■□□□□ 0.13
PTCD3-210ENST00000473829 RNF7Q9UBF6 113 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 OR52A1Q9UKL2 312 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 PCDHB10Q9UN67 800 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 PPIAL4AQ9Y536 164 aa15.86■□□□□ 0.13
PTCD3-210ENST00000473829 MXRA5Q9NR99 2828 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 A6NLC8 198 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 SLC16A6O15403 523 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 KRT8P05787 483 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 IRF2P14316 349 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 CD80P33681 288 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 THBS2P35442 1172 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 ISL1P61371 349 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF91Q05481 1191 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 BCL2L15Q5TBC7 163 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 LIPNQ5VXI9 398 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 OR1M1Q8NGA1 313 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 RHOXF1Q8NHV9 184 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 APH1BQ8WW43 257 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 PIGCQ92535 297 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 RNF166Q96A37 237 aaPredicted RBP15.85■□□□□ 0.13
PTCD3-210ENST00000473829 METTL17Q9H7H0 456 aaPredicted RBP15.85■□□□□ 0.13
PTCD3-210ENST00000473829 SLC22A13Q9Y226 551 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 MPC1Q9Y5U8 109 aa15.85■□□□□ 0.13
PTCD3-210ENST00000473829 A0A1B0GTI1 187 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 METTL15A6NJ78 407 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 FSTL3O95633 263 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 AVPP01185 164 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 WNT2P09544 360 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 EGR1P18146 543 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 HNF1AP20823 631 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 MAP2K3P46734 347 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 TP53I3Q53FA7 332 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 DMRTC1Q5HYR2 192 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 LYPD2Q6UXB3 125 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 KRT74Q7RTS7 529 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 ELMOD2Q8IZ81 293 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 FTMTQ8N4E7 242 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 GCSAMQ8N6F7 178 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 BOLLQ8N9W6 283 aaKnown RBP15.84■□□□□ 0.13
PTCD3-210ENST00000473829 DEFB108BQ8NET1 73 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 OR5P3Q8WZ94 311 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 RORBQ92753 470 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 LGALS12Q96DT0 336 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 RDH12Q96NR8 316 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 ACOXLQ9NUZ1 547 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 SNX5Q9Y5X3 404 aa15.84■□□□□ 0.13
PTCD3-210ENST00000473829 WNK2Q9Y3S1 2297 aa15.83■□□□□ 0.13
PTCD3-210ENST00000473829 ZNF816-ZNF321PA0A0X1KG74 233 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 ANXA2P2A6NMY6 339 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 C3orf80F5H4A9 247 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 P2RY10O00398 339 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 PHF1O43189 567 aaPredicted RBP15.83■□□□□ 0.12
PTCD3-210ENST00000473829 SULT1C4O75897 302 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 CLIC3O95833 236 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 DBTP11182 482 aaKnown RBP15.83■□□□□ 0.12
PTCD3-210ENST00000473829 RPS2P15880 293 aaKnown RBP15.83■□□□□ 0.12
PTCD3-210ENST00000473829 FAHP16930 419 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 SRD5A1P18405 259 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 IL5RAQ01344 420 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 MZT1Q08AG7 82 aa15.83■□□□□ 0.12
PTCD3-210ENST00000473829 SNCBQ16143 134 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms