RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 IGKV3-15P01624 115 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CD3EP07766 207 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAHP16930 419 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF14P17017 642 aaPredicted RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 AGAP20933 346 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CCL1P22362 96 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 TNFSF8P32971 234 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 RCVRNP35243 200 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAUP35544 74 aaKnown RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 NR4A2P43354 598 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 PITPNBP48739 271 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FABP6P51161 128 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 PPP5CP53041 499 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 KLF3P57682 345 aaPredicted RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 RPS11P62280 158 aaKnown RBP eCLIP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 MRPS10P82664 201 aaKnown RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF92Q03936 586 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 TLE1Q04724 770 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAM27E3Q08E93 113 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 GK2Q14410 553 aaPredicted RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 TSC22D1Q15714 1073 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 KISS1Q15726 138 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 NKPD1Q17RQ9 610 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF181Q2M3W8 571 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 SNAI3Q3KNW1 292 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 TMEM69Q5SWH9 247 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAM27D1Q5T7N8 215 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 MZT2BQ6NZ67 158 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF474Q6S9Z5 364 aaPredicted RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 SEM1Q6ZVN7 128 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 LSRQ86X29 649 aaPredicted RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 WDFY1Q8IWB7 410 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 GDPD1Q8N9F7 314 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 PLPP7Q8NBV4 271 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 DNAAF1Q8NEP3 725 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR5A2Q8NGI9 324 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR51A4Q8NGJ6 313 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR51A2Q8NGJ7 313 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR14K1Q8NGZ2 314 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR13G1Q8NGZ3 307 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 OR2AE1Q8NHA4 323 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FCAMRQ8WWV6 532 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 PPP1R14AQ96A00 147 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAM46BQ96A09 425 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAM3DQ96BQ1 224 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CMBLQ96DG6 245 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CCDC120Q96HB5 630 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 RNF170Q96K19 258 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CNTNAP3BQ96NU0 1288 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 DMRTA2Q96SC8 542 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CCDC32Q9BV29 185 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 REPIN1Q9BWE0 567 aaKnown RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CNTNAP3Q9BZ76 1288 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 CHST5Q9GZS9 411 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 SLIRPQ9GZT3 109 aaKnown RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 METTL17Q9H7H0 456 aaPredicted RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 PALMDQ9NP74 551 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 FAIMQ9NVQ4 179 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 TAS2R8Q9NYW2 309 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 MRPL15Q9P015 296 aaKnown RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 EXTL2Q9UBQ6 330 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 MRPS28Q9Y2Q9 187 aaKnown RBP5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 POLDIP2Q9Y2S7 368 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 STARD10Q9Y365 291 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 SLC25A15Q9Y619 301 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 ATP23Q9Y6H3 246 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 V9GYS6 101 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 VCANP13611 3396 aa5.06□□□□□ -1.6
RNU1-88P-201ENST00000459274 DNAH14Q0VDD8 3507 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 A0A0A6YYH2 397 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 TRIM64BA6NI03 449 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 A6NIN4 97 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 A6NJ64 397 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CD300LBA8K4G0 201 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 ZNF850A8MQ14 1090 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 PRR32B1ATL7 298 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 PRSS44E7EML9 344 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CTDSP2O14595 271 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 HPGDSO60760 199 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CRTAPO75718 401 aaPredicted RBP5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 WISP2O76076 250 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 HTR3BO95264 441 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 ECDO95905 644 aaPredicted RBP5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CST4P01036 141 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CHRM2P08172 466 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CLEC2LP0C7M8 214 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CECR9P0C854 216 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 SLC2A2P11168 524 aaPredicted RBP5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 GTF2F2P13984 249 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 IRF2P14316 349 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 RAB6AP20340 208 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 AZGP1P25311 298 aaKnown RBP5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 TGFBR1P36897 503 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 PTGFRP43088 359 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 POU3F4P49335 361 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 SRP9P49458 86 aaKnown RBP5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 EVX1P49640 407 aa5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 FOXG1P55316 489 aaPredicted RBP5.05□□□□□ -1.6
RNU1-88P-201ENST00000459274 CAV3P56539 151 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms