RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SHISA3A0PJX4 238 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 MEGF11A6BM72 1044 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 VSTM5A8MXK1 200 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 GMDSO60547 372 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 MYL9P24844 172 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 GCH1P30793 250 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 GNALP38405 381 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 FABP6P51161 128 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 SPCS2Q15005 226 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 TMEM255AQ5JRV8 349 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 OR2T2Q6IF00 324 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 ADAM5Q6NVV9 412 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 MEX3BQ6ZN04 569 aaKnown RBP12.21□□□□□ -0.45
SF3B1-204ENST00000414963 LRRTM1Q86UE6 522 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 SYNPRQ8TBG9 265 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 UBASH3BQ8TF42 649 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 TECTBQ96PL2 329 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 SLITRK2Q9H156 845 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 TCF7L1Q9HCS4 588 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 KCNN3Q9UGI6 736 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 RHBDD3Q9Y3P4 386 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 CMAHPQ9Y471 501 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 ATP23Q9Y6H3 246 aa12.21□□□□□ -0.45
SF3B1-204ENST00000414963 ANKRD61A6NGH8 418 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 E7EQL1 145 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 ALDOBP05062 364 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 RAB3AP20336 220 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 SDC2P34741 201 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 TGFBR1P36897 503 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 RPS19P39019 145 aaKnown RBP12.2□□□□□ -0.46
SF3B1-204ENST00000414963 EVX1P49640 407 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 PSMD7P51665 324 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 CEP78Q5JTW2 689 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 CDH26Q8IXH8 852 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 OR1M1Q8NGA1 313 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 LILRB1Q8NHL6 650 aaPredicted RBP12.2□□□□□ -0.46
SF3B1-204ENST00000414963 NDNFQ8TB73 568 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 MRPL24Q96A35 216 aaKnown RBP12.2□□□□□ -0.46
SF3B1-204ENST00000414963 ORAI1Q96D31 301 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 DCSTAMPQ9H295 470 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 TMEM138Q9NPI0 162 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 MPC1Q9Y5U8 109 aa12.2□□□□□ -0.46
SF3B1-204ENST00000414963 IGKV1-9A0A0C4DH69 117 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 FAM221AA4D161 298 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 A6NIN4 97 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ANKRD30BLA7E2S9 258 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 PRSS44E7EML9 344 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 PDCD5O14737 125 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 SULT1B1O43704 296 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 LILRA1O75019 489 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 CDRT1O95170 752 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 CLDN1O95832 211 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 NRASP01111 189 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 PRF1P14222 555 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ADRA2CP18825 462 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ATF1P18846 271 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 SERPINB10P48595 397 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 PRSS12P56730 875 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 KLF3P57682 345 aaPredicted RBP12.19□□□□□ -0.46
SF3B1-204ENST00000414963 SELENOVP59797 346 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 PPP3R1P63098 170 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 UBE2V2Q15819 145 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ADIPOQQ15848 244 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 MOGQ16653 247 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ALKBH6Q3KRA9 238 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ZNF672Q499Z4 452 aaPredicted RBP12.19□□□□□ -0.46
SF3B1-204ENST00000414963 OR5AS1Q8N127 324 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 DNAAF1Q8NEP3 725 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 SLC25A46Q96AG3 418 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 PIK3IP1Q96FE7 263 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 SLC30A2Q9BRI3 323 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 SLC22A4Q9H015 551 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 ABCB9Q9NP78 766 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 POU2F3Q9UKI9 436 aa12.19□□□□□ -0.46
SF3B1-204ENST00000414963 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
SF3B1-204ENST00000414963 A6NNC1 897 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 TMEM127O75204 238 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 PLAUP00749 431 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 ERCC1P07992 297 aaPredicted RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 OR4A8P0C604 315 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 RAB3BP20337 219 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 PRKACBP22694 351 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 CFPP27918 469 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 BDKRB2P30411 391 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
SF3B1-204ENST00000414963 SERPINF1P36955 418 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 EFNB3Q15768 340 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 VHLLQ6RSH7 139 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 LRP11Q86VZ4 500 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 LYPD6Q86Y78 171 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 CROCCP3Q8IVE0 287 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 NKAIN3Q8N8D7 197 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 OR51A2Q8NGJ7 313 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 OR13C9Q8NGT0 318 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 PIGCQ92535 297 aa12.18□□□□□ -0.46
SF3B1-204ENST00000414963 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms