RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 EFNB3Q15768 340 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 SSX1Q16384 188 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 Q499Y3 187 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 ZMAT1Q5H9K5 638 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 OR2T2Q6IF00 324 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 LRRC75A-AS1Q8N1F1 130 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 MUC15Q8N387 334 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 OR56B2PQ8NGI1 322 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 OR14K1Q8NGZ2 314 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 SYT3Q9BQG1 590 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 MRPL37Q9BZE1 423 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 CYSLTR2Q9NS75 346 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 ENPP5Q9UJA9 477 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 LAMP3Q9UQV4 416 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 PIGLQ9Y2B2 252 aa14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 NOP16Q9Y3C1 178 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-208ENST00000409531 ARID1AO14497 2285 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 TRBV5-5A0A0J9YX44 114 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ZNF816-ZNF321PA0A0X1KG74 233 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 PLSCR5A0PG75 271 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ANKRD30BLA7E2S9 258 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 GATBO75879 557 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 CD36P16671 472 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ZNF20P17024 532 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 GALP22466 123 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ALDH3B2P48448 385 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 MSMPQ1L6U9 139 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 TIMM50Q3ZCQ8 353 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 AGAP6Q5VW22 663 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 OR13F1Q8NGS4 319 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 RGP1Q92546 391 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 SOX7Q9BT81 388 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 SLC22A4Q9H015 551 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ABCB9Q9NP78 766 aa14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ZNF275Q9NSD4 429 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 MRPL15Q9P015 296 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 SF3B6Q9Y3B4 125 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-208ENST00000409531 ARFGEF3Q5TH69 2177 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 ZNF879B4DU55 563 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 H3BSH0 61 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 RGS9O75916 674 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 BMP4P12644 408 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 ACKR3P25106 362 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 GNALP38405 381 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 RPS11P62280 158 aaKnown RBP eCLIP14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 RPS25P62851 125 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 TNK1Q13470 666 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 NKPD1Q17RQ9 610 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 GPR141Q7Z602 305 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 LRP11Q86VZ4 500 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 BHLHE23Q8NDY6 225 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 OR8G5Q8NG78 346 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 OR10AC1Q8NH08 325 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 PP6455Q8WZ26 134 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 PHYHIPQ92561 330 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 TMEM203Q969S6 136 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 TMEM106AQ96A25 262 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 CXorf56Q9H5V9 222 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 TAAR3PQ9P1P4 343 aa14.11□□□□□ -0.15
TSPAN4-208ENST00000409531 AKAP9Q99996 3911 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 CST4P01036 141 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 SOD3P08294 240 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 PAX1P15863 534 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 FAHP16930 419 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 SOX2P48431 317 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 PRSS12P56730 875 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 SNRPD2P62316 118 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 ACSM3Q53FZ2 586 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 SHEQ5VZ18 495 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 CD200R1LQ6Q8B3 271 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 KRT74Q7RTS7 529 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 TGIF2LYQ8IUE0 185 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 SERPINA12Q8IW75 414 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 OR5AS1Q8N127 324 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 PARP16Q8N5Y8 322 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 OR5D14Q8NGL3 314 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 OR13C5Q8NGS8 318 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 OR13G1Q8NGZ3 307 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 TECTBQ96PL2 329 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 OR14A2Q96R54 314 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 PAPOLGQ9BWT3 736 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 GSX2Q9BZM3 304 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 CBLN4Q9NTU7 201 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 TMEM100Q9NV29 134 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 ZNF701Q9NV72 531 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 STUB1Q9UNE7 303 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 MPC1Q9Y5U8 109 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 HIVEP1P15822 2718 aa14.1□□□□□ -0.15
TSPAN4-208ENST00000409531 USF3Q68DE3 2245 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 M0R233 179 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 OVOL3O00110 214 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 SC5DO75845 299 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 TGFBR2P37173 567 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 MMP15P51511 669 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 SWI5Q1ZZU3 235 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 ALKBH6Q3KRA9 238 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 DTX2Q86UW9 622 aa14.09□□□□□ -0.15
TSPAN4-208ENST00000409531 FGGYQ96C11 551 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms