RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TNCP24821 2201 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 DUXBA0A1W2PPF3 345 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 PTGESO14684 152 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FOXH1O75593 365 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 KLF7O75840 302 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 OR2F2O95006 317 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SOX14O95416 240 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 HLCSP50747 726 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 AQP4P55087 323 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 OR2F1Q13607 317 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 CIRBPQ14011 172 aaKnown RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 ADPRMQ3LIE5 342 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 BEX5Q5H9J7 111 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 B3GNT9Q6UX72 402 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 COMTD1Q86VU5 262 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 PRR18Q8N4B5 295 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 KHSRPQ92945 711 aaKnown RBP eCLIP2.46□□□□□ -2.027e-7■■■□□ 17.2
CHD9-202ENST00000398510 ARL6Q9H0F7 186 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SH3BGRL2Q9UJC5 107 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 PPIL1Q9Y3C6 166 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FREM1Q5H8C1 2179 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 C5orf49A4QMS7 147 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 NPIPB13A6NJU9 1138 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZFP92A6NM28 416 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZBTB42B2RXF5 422 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 NPIPB4C9JG80 1138 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 HS3ST1O14792 307 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ARPC3O15145 178 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 NME2P1O60361 137 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 MT-CO3P00414 261 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 TMIGD3P0DMS9 266 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 MMP11P24347 488 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 GABRA4P48169 554 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 EIF4EBP2Q13542 120 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 MDGA2Q7Z553 956 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 AKR7LQ8NHP1 331 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SLC37A2Q8TED4 501 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZNRF4Q8WWF5 429 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZBTB10Q96DT7 871 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 MRAP2Q96G30 205 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 NMES1Q9C002 83 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 NRSN2Q9GZP1 204 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ARRDC1-AS1Q9H2J1 176 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 AMBNQ9NP70 447 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 PEMTQ9UBM1 199 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZNF230Q9UIE0 474 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 RCL1Q9Y2P8 373 aaKnown RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 KCNK7Q9Y2U2 307 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 TMED3Q9Y3Q3 217 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 TRGV5A0A0B4J1U4 118 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 TISP43B9A030 160 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 HAX1O00165 279 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 MPDU1O75352 247 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 HMGN2P05204 90 aaKnown RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 SULT1A3P0DMM9 295 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SULT1A4P0DMN0 295 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ACKR3P25106 362 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 CD81P60033 236 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZNF658BQ4V348 819 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 PDZD11Q5EBL8 140 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 UQCC3Q6UW78 93 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 OR6V1Q8N148 313 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 GATSQ8NAP1 163 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 NT5CQ8TCD5 201 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FRZBQ92765 325 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 BIRC7Q96CA5 298 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SUCNR1Q9BXA5 334 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 GFOD1Q9NXC2 390 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 RNF114Q9Y508 228 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 MED12Q93074 2177 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 COL4A6Q14031 1691 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 TRGV8A0A0C4DH27 118 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 UBE2L6O14933 153 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 CDRT1O95170 752 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FOLR1P15328 257 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FUT1P19526 365 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZNF136P52737 540 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SHBQ15464 509 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 CCSMST1Q4G0I0 132 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FAM74A3Q4VXF1 159 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 OR10P1Q8NGE3 313 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FAM3DQ96BQ1 224 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A44Q96H78 314 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 C4orf36Q96KX1 117 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 FBXO34Q9NWN3 711 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 VSX1Q9NZR4 365 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 IL17CQ9P0M4 197 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 DAPP1Q9UN19 280 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 SPTAN1Q13813 2472 aaKnown RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 RAI1Q7Z5J4 1906 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 LOC100509620A0A075B734 347 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 ZNF860A6NHJ4 632 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 B9A039 149 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 GCGP01275 180 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 IGLV3-27P01718 113 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 MBPP02686 304 aaPredicted RBP2.46□□□□□ -2.02
CHD9-202ENST00000398510 S100A11P31949 105 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 OPRK1P41145 380 aa2.46□□□□□ -2.02
CHD9-202ENST00000398510 GNG4P50150 75 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms