RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 DHDHQ9UQ10 334 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 EMC9Q9Y3B6 208 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 CLDN16Q9Y5I7 305 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 HS3ST3B1Q9Y662 390 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 COL6A6A6NMZ7 2263 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 PHF3Q92576 2039 aaKnown RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 A0A0B4J2A0 478 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 TMEM269A0A1B0GVZ9 245 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 RRP8O43159 456 aaKnown RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 ZNF616Q08AN1 781 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 TMEM69Q5SWH9 247 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 NDUFAF7Q7L592 441 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 DCXRQ7Z4W1 244 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 THNSL2Q86YJ6 484 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 CCDC54Q8NEL0 328 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 NEK7Q8TDX7 302 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 TMEM106AQ96A25 262 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 UTP23Q9BRU9 249 aaKnown RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 SHPKQ9UHJ6 478 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 ICAM5Q9UMF0 924 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 SLC22A13Q9Y226 551 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 MMP24Q9Y5R2 645 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 NAP1L6A6NFF2 107 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 B4E171 279 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 RAB5AP20339 215 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 MAPK3P27361 379 aaPredicted RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 FXYD6P3P58550 94 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 LTBQ06643 244 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 WIPI1Q5MNZ9 446 aaPredicted RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 CLEC2AQ6UVW9 174 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 PXKQ7Z7A4 578 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 SLC43A2Q8N370 569 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 CDC6Q99741 560 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 MRPL37Q9BZE1 423 aaKnown RBP8.19□□□□□ -1.1
CALD1-202ENST00000361901 ATG5Q9H1Y0 275 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 AUNIPQ9H7T9 357 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 KCNJ16Q9NPI9 418 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 UPB1Q9UBR1 384 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 PUS1Q9Y606 427 aaKnown RBP eCLIP8.19□□□□□ -1.1
CALD1-202ENST00000361901 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
CALD1-202ENST00000361901 A0A1B0GUH1 482 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 PRSS37A4D1T9 235 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 MT-ATP6P00846 226 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ZNF20P17024 532 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 EFNA3P52797 238 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 F2RL1P55085 397 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 TPBGQ13641 420 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ZNF239Q16600 458 aaKnown RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 C4orf17Q53FE4 359 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 RNASE10Q5GAN6 216 aaKnown RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 ZNF101Q8IZC7 436 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 NPEPL1Q8NDH3 523 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 HSD17B8Q92506 261 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 AKR1E2Q96JD6 320 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 NAA11Q9BSU3 229 aaPredicted RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 CHST11Q9NPF2 352 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 NRIP3Q9NQ35 241 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 CCDC187A0A096LP49 1063 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 MEX3AA1L020 520 aaKnown RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 ANKUB1A6NFN9 424 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 TNFSF11O14788 317 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 RBBP9O75884 186 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 SCGNO76038 276 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 IGHG1P01857 330 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 EPXP11678 715 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 CTLA4P16410 223 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 GALNSP34059 522 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 CSNK1A1P48729 337 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 GABREP78334 506 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 SPOCK1Q08629 439 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ZNF585AQ6P3V2 769 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 SFXN4Q6P4A7 337 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ARRDC1Q8N5I2 433 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 OR13C3Q8NGS6 347 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ROBO4Q8WZ75 1007 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ST8SIA1Q92185 356 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 EXTL1Q92935 676 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 S100A16Q96FQ6 103 aaKnown RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 CYSLTR2Q9NS75 346 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 FAM212BQ9NTI7 297 aaPredicted RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 RASL12Q9NYN1 266 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 SIRT4Q9Y6E7 314 aaPredicted RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 FRYLO94915 3013 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 IGKV1D-42A0A075B6H8 117 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 A0A1W2PPE3 182 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 NPIPB9F8W1W9 429 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 CXCL13O43927 109 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 TSPAN15O95858 294 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 SNRPCP09234 159 aaKnown RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 GTF2F2P13984 249 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 NUTF2P61970 127 aaKnown RBP8.18□□□□□ -1.1
CALD1-202ENST00000361901 TNFRSF9Q07011 255 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 MESTQ5EB52 335 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 ATP1A1-AS1Q5TC04 95 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 LPCAT3Q6P1A2 487 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 BPIFB2Q8N4F0 458 aa8.18□□□□□ -1.1
CALD1-202ENST00000361901 EIF4E3Q8N5X7 224 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms