RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZNF671Q8TAW3 534 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 FBXO17Q96EF6 278 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 FAM173AQ9BQD7 235 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 ADAT1Q9BUB4 502 aaKnown RBP11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PPP1R3EQ9H7J1 279 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 NUDT15Q9NV35 164 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 BOKQ9UMX3 212 aaPredicted RBP11.14□□□□□ -0.63
GGPS1-202ENST00000358966 SMG1Q96Q15 3661 aaKnown RBP11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 A0A1B0GVI7 797 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 TMEM212A6NML5 194 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 GPR171O14626 319 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 LRP3O75074 770 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
GGPS1-202ENST00000358966 NBL1P41271 181 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 MEOX1P50221 254 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 FDCSPQ8NFU4 85 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 ASB17Q8WXJ9 295 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 ADGRG7Q96K78 797 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 FER1L6-AS2Q96M78 137 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 DEFB127Q9H1M4 99 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 TCF7L1Q9HCS4 588 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
GGPS1-202ENST00000358966 NBEAQ8NFP9 2946 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 CHD8Q9HCK8 2581 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ADGRG4Q8IZF6 3080 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 MEIKINA0A087WXM9 373 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 TRAV1-2A0A0B4J238 106 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 TRBV5-5A0A0J9YX44 114 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 C5orf52A6NGY3 159 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 E9PLN8 166 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 UBE2CO00762 179 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 SRSF10O75494 262 aaKnown RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 GATBO75879 557 aaKnown RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 SLC6A1P30531 599 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 RAC3P60763 192 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ARG2P78540 354 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 COTL1Q14019 142 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 GPR176Q14439 515 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 HIST3H3Q16695 136 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 PCK2Q16822 640 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 C9orf135Q5VTT2 229 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 JMJD6Q6NYC1 403 aaPredicted RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 METAP1DQ6UB28 335 aaPredicted RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 LINGO2Q7L985 606 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 CATSPERDQ86XM0 798 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 PUSL1Q8N0Z8 303 aaKnown RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 TMEM123Q8N131 208 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 BPIFCQ8NFQ6 507 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 GPR148Q8TDV2 347 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 RNF133Q8WVZ7 376 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ELMOD3Q96FG2 381 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ABHD1Q96SE0 405 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 TCEAL7Q9BRU2 100 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF552Q9H707 407 aaPredicted RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF319Q9P2F9 582 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 SLC5A6Q9Y289 635 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 FLVCR1Q9Y5Y0 555 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 LOC107986453A0A1B0GWG9 222 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 MEX3AA1L020 520 aaKnown RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 PHYHO14832 338 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF432O94892 652 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 TMIGD3P0DMS9 266 aaPredicted RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 CXCL2P19875 107 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 MZT2AQ6P582 158 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 PRSS45Q7RTY3 260 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 TPRA1Q86W33 373 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
GGPS1-202ENST00000358966 OR2V1Q8NHB1 315 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
GGPS1-202ENST00000358966 OR5H15A6NDH6 313 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 IFITM5A6NNB3 132 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF716A6NP11 495 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ALDOBP05062 364 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 SP1P08047 785 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 RASGEF1BQ0VAM2 473 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 FCRLAQ7L513 359 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 TEX19Q8NA77 164 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
GGPS1-202ENST00000358966 FNDC9Q8TBE3 224 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ASB5Q8WWX0 329 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ZFP3Q96NJ6 502 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 RIMS4Q9H426 269 aaPredicted RBP11.12□□□□□ -0.63
GGPS1-202ENST00000358966 METTL17Q9H7H0 456 aaPredicted RBP11.12□□□□□ -0.63
GGPS1-202ENST00000358966 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ABI3Q9P2A4 366 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 KLHL9Q9P2J3 617 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 R4GMQ9 66 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 DISC1C4P0D8 188 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 L7N2F9 121 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 AQP8O94778 261 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 MBP02144 154 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms