RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FN3KQ9H479 309 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 U3KQK5 164 aa13.19□□□□□ -0.3
NECTIN1-202ENST00000340882 A6NDX4 124 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 H0YAE9 185 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 IFNA14P01570 189 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 FAHP16930 419 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 POU1F1P28069 291 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 IFNA8P32881 189 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 GRK5P34947 590 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 MXRA7P84157 204 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 CNN3Q15417 329 aaKnown RBP13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 OR5AU1Q8NGC0 362 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 ANGPTL6Q8NI99 470 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 GMPR2Q9P2T1 348 aaKnown RBP13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 TCF19Q9Y242 345 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 N6AMT1Q9Y5N5 214 aa13.18□□□□□ -0.3
NECTIN1-202ENST00000340882 TRBV23-1A0A0A0MS06 115 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 PF4P02776 101 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 GSK3BP49841 420 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 MZT1Q08AG7 82 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 BLMHQ13867 455 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 DPY19L2P2Q6ZN68 376 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 CCDC121Q6ZUS5 278 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 ZBTB46Q86UZ6 589 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 DTX3Q8N9I9 347 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 OR5D13Q8NGL4 314 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 LZICQ8WZA0 190 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 TLCD1Q96CP7 247 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 RSRC1Q96IZ7 334 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 TLNRD1Q9H1K6 362 aa13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 RPRD1BQ9NQG5 326 aaKnown RBP13.17□□□□□ -0.3
NECTIN1-202ENST00000340882 E9PQ18 207 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 C3orf84H3BNL1 204 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 SIGLEC5O15389 551 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 AKR7A2O43488 359 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 PEX14O75381 377 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 IFNW1P05000 195 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 JUNBP17275 347 aaPredicted RBP13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 NAA10P41227 235 aaPredicted RBP13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 OMPP47874 163 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 PRKXP51817 358 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 CAV3P56539 151 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 CYLC2Q14093 348 aaPredicted RBP13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 SLC36A3Q495N2 470 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 NKAPLQ5M9Q1 402 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 LDLRAD2Q5SZI1 272 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 ERICH5Q6P6B1 374 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 LYPD4Q6UWN0 246 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 RNF144BQ7Z419 303 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 ZNRF1Q8ND25 227 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 TSPEARQ8WU66 669 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 RPL3LQ92901 407 aaKnown RBP13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 SPTSSAQ969W0 71 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 PRSS22Q9GZN4 317 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 C19orf12Q9NSK7 152 aa13.16□□□□□ -0.3
NECTIN1-202ENST00000340882 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 NKX6-3A6NJ46 265 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 ANKRD30BLA7E2S9 258 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 SYNGR1O43759 233 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 HLA-DQA2P01906 255 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 ACAA1P09110 424 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 TROVE2P10155 538 aaKnown RBP eCLIP13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 HIST1H1CP16403 213 aaKnown RBP13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 COX7A1P24310 79 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 FAM3AP98173 230 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 FAM185AQ8N0U4 392 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 ZNRF4Q8WWF5 429 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 SPSB4Q96A44 273 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 MED30Q96HR3 178 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 FGF23Q9GZV9 251 aaPredicted RBP13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
NECTIN1-202ENST00000340882 IGKV1D-17A0A075B6S4 117 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 CCDC159P0C7I6 412 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 SEC23BQ15437 767 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 KLHL12Q53G59 568 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 C10orf99Q6UWK7 81 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 SLC16A9Q7RTY1 509 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 TMEM120AQ9BXJ8 343 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 RHBDD3Q9Y3P4 386 aa13.14□□□□□ -0.31
NECTIN1-202ENST00000340882 HYDINQ4G0P3 5121 aa13.13□□□□□ -0.31
NECTIN1-202ENST00000340882 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
NECTIN1-202ENST00000340882 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms